Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

CNTRL (centriolin)

Identity

Alias (NCBI)CEP1
CEP110
FAN
bA165P4.1
HGNC (Hugo) CNTRL
HGNC Previous nameCEP1
 CEP110
HGNC Previous namecentrosomal protein 1
 centrosomal protein 110kDa
LocusID (NCBI) 11064
Atlas_Id 232
Location 9q33.2  [Link to chromosome band 9q33]
Location_base_pair Starts at 121088296 and ends at 121177610 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
CNTRL (9q33.2) / CNTRL (9q33.2)CNTRL (9q33.2) / FGFR1 (8p11.23)CNTRL (9q33.2) / KIT (4q12)
CNTRL (9q33.2) / MALAT1 (11q13.1)FGFR1 (8p11.23) / CNTRL (9q33.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



Other Leukemias implicated (Data extracted from papers in the Atlas) [ 3 ]
  8p11 myeloproliferative syndrome (FGFR1)
t(8;9)(p12;q33) CNTRL/FGFR1
t(4;9)(q12;q33) CNTRL/KIT


External links

Nomenclature
HGNC (Hugo)CNTRL   1858
Cards
Entrez_Gene (NCBI)CNTRL    centriolin
AliasesCEP1; CEP110; FAN; bA165P4.1
GeneCards (Weizmann)CNTRL
Ensembl hg19 (Hinxton)ENSG00000119397 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000119397 [Gene_View]  ENSG00000119397 [Sequence]  chr9:121088296-121177610 [Contig_View]  CNTRL [Vega]
ICGC DataPortalENSG00000119397
TCGA cBioPortalCNTRL
AceView (NCBI)CNTRL
Genatlas (Paris)CNTRL
SOURCE (Princeton)CNTRL
Genetics Home Reference (NIH)CNTRL
Genomic and cartography
GoldenPath hg38 (UCSC)CNTRL  -     chr9:121088296-121177610 +  9q33.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CNTRL  -     9q33.2   [Description]    (hg19-Feb_2009)
GoldenPathCNTRL - 9q33.2 [CytoView hg19]  CNTRL - 9q33.2 [CytoView hg38]
ImmunoBaseENSG00000119397
genome Data Viewer NCBICNTRL [Mapview hg19]  
OMIM605496   
Gene and transcription
Genbank (Entrez)AA287401 AA398748 AF083322 AF513978 AK074079
RefSeq transcript (Entrez)NM_001330762 NM_001369892 NM_001369893 NM_001369894 NM_001369895 NM_001369896 NM_007018
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CNTRL
Alternative Splicing GalleryENSG00000119397
Gene ExpressionCNTRL [ NCBI-GEO ]   CNTRL [ EBI - ARRAY_EXPRESS ]   CNTRL [ SEEK ]   CNTRL [ MEM ]
Gene Expression Viewer (FireBrowse)CNTRL [ Firebrowse - Broad ]
GenevisibleExpression of CNTRL in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)11064
GTEX Portal (Tissue expression)CNTRL
Human Protein AtlasENSG00000119397-CNTRL [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CNTRL
Blocks (Seattle)CNTRL
Human Protein Atlas [tissue]ENSG00000119397-CNTRL [tissue]
HPRD05691
IPIIPI00657962   IPI00376383   IPI00887632   IPI00888387   IPI00646366   IPI00645181   IPI00643703   IPI00644195   IPI00646879   IPI00953121   
Protein Interaction databases
BioGRIDCNTRL
STRING (EMBL)CNTRL
ZODIACCNTRL
Ontologies - Pathways
Litterature
PubMed43 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXCNTRL
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Mar 25 19:16:20 CET 2021

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.