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COL18A1-AS2 (COL18A1 antisense RNA 2)

Identity

Alias_namesCOL18A1 antisense RNA 2 (non-protein coding)
Other alias-
HGNC (Hugo) COL18A1-AS2
LocusID (NCBI) 100874236
Atlas_Id 61984
Location 21q22.3  [Link to chromosome band 21q22]
Location_base_pair Starts at 45407386 and ends at 45410065 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)COL18A1-AS2   40155
Cards
Entrez_Gene (NCBI)COL18A1-AS2  100874236  COL18A1 antisense RNA 2
Aliases
GeneCards (Weizmann)COL18A1-AS2
Ensembl hg19 (Hinxton)ENSG00000224574 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000224574 [Gene_View]  chr21:45407386-45410065 [Contig_View]  COL18A1-AS2 [Vega]
ICGC DataPortalENSG00000224574
TCGA cBioPortalCOL18A1-AS2
AceView (NCBI)COL18A1-AS2
Genatlas (Paris)COL18A1-AS2
WikiGenes100874236
SOURCE (Princeton)COL18A1-AS2
Genetics Home Reference (NIH)COL18A1-AS2
Genomic and cartography
GoldenPath hg38 (UCSC)COL18A1-AS2  -     chr21:45407386-45410065 -  21q22.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)COL18A1-AS2  -     21q22.3   [Description]    (hg19-Feb_2009)
EnsemblCOL18A1-AS2 - 21q22.3 [CytoView hg19]  COL18A1-AS2 - 21q22.3 [CytoView hg38]
Mapping of homologs : NCBICOL18A1-AS2 [Mapview hg19]  COL18A1-AS2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)COL18A1-AS2
Cluster EST : UnigeneHs.589901 [ NCBI ]
CGAP (NCI)Hs.589901
Alternative Splicing GalleryENSG00000224574
Gene ExpressionCOL18A1-AS2 [ NCBI-GEO ]   COL18A1-AS2 [ EBI - ARRAY_EXPRESS ]   COL18A1-AS2 [ SEEK ]   COL18A1-AS2 [ MEM ]
Gene Expression Viewer (FireBrowse)COL18A1-AS2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100874236
GTEX Portal (Tissue expression)COL18A1-AS2
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)COL18A1-AS2
DMDM Disease mutations100874236
Blocks (Seattle)COL18A1-AS2
Human Protein AtlasENSG00000224574
Protein Interaction databases
FunCoupENSG00000224574
BioGRIDCOL18A1-AS2
STRING (EMBL)COL18A1-AS2
ZODIACCOL18A1-AS2
Ontologies - Pathways
Huge Navigator COL18A1-AS2 [HugePedia]
snp3D : Map Gene to Disease100874236
BioCentury BCIQCOL18A1-AS2
ClinGenCOL18A1-AS2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100874236
Clinical trialCOL18A1-AS2
Miscellaneous
canSAR (ICR)COL18A1-AS2 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineCOL18A1-AS2
EVEXCOL18A1-AS2
GoPubMedCOL18A1-AS2
iHOPCOL18A1-AS2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:44:10 CEST 2017

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