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COL4A2-AS1 (COL4A2 antisense RNA 1)

Identity

Alias_namesCOL4A2 antisense RNA 1 (non-protein coding)
Other alias-
HGNC (Hugo) COL4A2-AS1
LocusID (NCBI) 100874203
Atlas_Id 61992
Location 13q34  [Link to chromosome band 13q34]
Location_base_pair Starts at 110502576 and ends at 110508179 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)COL4A2-AS1   40156
Cards
Entrez_Gene (NCBI)COL4A2-AS1  100874203  COL4A2 antisense RNA 1
Aliases
GeneCards (Weizmann)COL4A2-AS1
Ensembl hg19 (Hinxton)ENSG00000232814 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000232814 [Gene_View]  chr13:110502576-110508179 [Contig_View]  COL4A2-AS1 [Vega]
ICGC DataPortalENSG00000232814
TCGA cBioPortalCOL4A2-AS1
AceView (NCBI)COL4A2-AS1
Genatlas (Paris)COL4A2-AS1
WikiGenes100874203
SOURCE (Princeton)COL4A2-AS1
Genetics Home Reference (NIH)COL4A2-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)COL4A2-AS1  -     chr13:110502576-110508179 -  13q34   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)COL4A2-AS1  -     13q34   [Description]    (hg19-Feb_2009)
EnsemblCOL4A2-AS1 - 13q34 [CytoView hg19]  COL4A2-AS1 - 13q34 [CytoView hg38]
Mapping of homologs : NCBICOL4A2-AS1 [Mapview hg19]  COL4A2-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BX482237
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)COL4A2-AS1
Cluster EST : UnigeneHs.508716 [ NCBI ]
CGAP (NCI)Hs.508716
Alternative Splicing GalleryENSG00000232814
Gene ExpressionCOL4A2-AS1 [ NCBI-GEO ]   COL4A2-AS1 [ EBI - ARRAY_EXPRESS ]   COL4A2-AS1 [ SEEK ]   COL4A2-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)COL4A2-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100874203
GTEX Portal (Tissue expression)COL4A2-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)COL4A2-AS1
DMDM Disease mutations100874203
Blocks (Seattle)COL4A2-AS1
Human Protein AtlasENSG00000232814
Protein Interaction databases
FunCoupENSG00000232814
BioGRIDCOL4A2-AS1
STRING (EMBL)COL4A2-AS1
ZODIACCOL4A2-AS1
Ontologies - Pathways
Huge Navigator COL4A2-AS1 [HugePedia]
snp3D : Map Gene to Disease100874203
BioCentury BCIQCOL4A2-AS1
ClinGenCOL4A2-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100874203
Clinical trialCOL4A2-AS1
Miscellaneous
canSAR (ICR)COL4A2-AS1 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineCOL4A2-AS1
EVEXCOL4A2-AS1
GoPubMedCOL4A2-AS1
iHOPCOL4A2-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:05:09 CEST 2017

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