COPS7A (COP9 signalosome subunit 7A)

2007-04-01  

Identity

HGNC
COPS7A
LOCATION
12p13.31
LOCUSID
50813
ALIAS
CSN7,CSN7A,SGN7a
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 50813
MIM: 616009
HGNC: 16758
Ensembl: ENSG00000111652

Variants:

dbSNP: 50813
ClinVar: 50813
TCGA: ENSG00000111652
COSMIC: COPS7A

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000111652ENST00000229251Q9UBW8
ENSG00000111652ENST00000455113G3XAP1
ENSG00000111652ENST00000534877Q9UBW8
ENSG00000111652ENST00000534947Q9UBW8
ENSG00000111652ENST00000536872G3XAP1
ENSG00000111652ENST00000537022F5H4Z0
ENSG00000111652ENST00000538375G3XAP1
ENSG00000111652ENST00000538410F5H248
ENSG00000111652ENST00000538753F5GYF7
ENSG00000111652ENST00000539735Q9UBW8
ENSG00000111652ENST00000540408G3XAP1
ENSG00000111652ENST00000541866F5H7C6
ENSG00000111652ENST00000543155Q9UBW8
ENSG00000111652ENST00000543170G3XAP1
ENSG00000111652ENST00000543537G3XAP1
ENSG00000111652ENST00000543939G3XAP1
ENSG00000111652ENST00000544316F5H3M6
ENSG00000111652ENST00000544725F5H4U8
ENSG00000111652ENST00000546229F5GXT7
ENSG00000111652ENST00000626119G3XAP1

Expression (GTEx)

0
50
100
150
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Pathways

PathwaySourceExternal ID
Vesicle-mediated transportREACTOMER-HSA-5653656
Membrane TraffickingREACTOMER-HSA-199991
DNA RepairREACTOMER-HSA-73894
Nucleotide Excision RepairREACTOMER-HSA-5696398
Global Genome Nucleotide Excision Repair (GG-NER)REACTOMER-HSA-5696399
DNA Damage Recognition in GG-NERREACTOMER-HSA-5696394
Transcription-Coupled Nucleotide Excision Repair (TC-NER)REACTOMER-HSA-6781827
Formation of TC-NER Pre-Incision ComplexREACTOMER-HSA-6781823
Clathrin-mediated endocytosisREACTOMER-HSA-8856828
Cargo recognition for clathrin-mediated endocytosisREACTOMER-HSA-8856825

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

Citation

Dessen P

COPS7A (COP9 signalosome subunit 7A)

Atlas Genet Cytogenet Oncol Haematol. 2007-04-01

Online version: http://atlasgeneticsoncology.org/gene/47241/cops7a