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COQ10A (coenzyme Q10A)

Identity

Alias_namescoenzyme Q10 homolog A (yeast)
coenzyme Q10 homolog A (S. cerevisiae)
Alias_symbol (synonym)FLJ32452
Other alias-
HGNC (Hugo) COQ10A
LocusID (NCBI) 93058
Atlas_Id 54229
Location 12q13.3  [Link to chromosome band 12q13]
Location_base_pair Starts at 56267283 and ends at 56270966 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
COQ10A (12q13.3) / NABP2 (12q13.3)COQ10A (12q13.3) / USP5 (12p13.31)COQ10A 12q13.3 OBFC2B
COQ10A 12q13.3 / USP5 12p13.31

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)COQ10A   26515
Cards
Entrez_Gene (NCBI)COQ10A  93058  coenzyme Q10A
Aliases
GeneCards (Weizmann)COQ10A
Ensembl hg19 (Hinxton)ENSG00000135469 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000135469 [Gene_View]  chr12:56267283-56270966 [Contig_View]  COQ10A [Vega]
ICGC DataPortalENSG00000135469
TCGA cBioPortalCOQ10A
AceView (NCBI)COQ10A
Genatlas (Paris)COQ10A
WikiGenes93058
SOURCE (Princeton)COQ10A
Genetics Home Reference (NIH)COQ10A
Genomic and cartography
GoldenPath hg38 (UCSC)COQ10A  -     chr12:56267283-56270966 +  12q13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)COQ10A  -     12q13.3   [Description]    (hg19-Feb_2009)
EnsemblCOQ10A - 12q13.3 [CytoView hg19]  COQ10A - 12q13.3 [CytoView hg38]
Mapping of homologs : NCBICOQ10A [Mapview hg19]  COQ10A [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK057003 AK057014 AY358861 BC002435 BC026922
RefSeq transcript (Entrez)NM_001099337 NM_144576
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)COQ10A
Cluster EST : UnigeneHs.4096 [ NCBI ]
CGAP (NCI)Hs.4096
Alternative Splicing GalleryENSG00000135469
Gene ExpressionCOQ10A [ NCBI-GEO ]   COQ10A [ EBI - ARRAY_EXPRESS ]   COQ10A [ SEEK ]   COQ10A [ MEM ]
Gene Expression Viewer (FireBrowse)COQ10A [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)93058
GTEX Portal (Tissue expression)COQ10A
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96MF6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96MF6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96MF6
Splice isoforms : SwissVarQ96MF6
PhosPhoSitePlusQ96MF6
Domains : Interpro (EBI)COQ10_START    START-like_dom   
Domain families : Pfam (Sanger)Polyketide_cyc (PF03364)   
Domain families : Pfam (NCBI)pfam03364   
Conserved Domain (NCBI)COQ10A
DMDM Disease mutations93058
Blocks (Seattle)COQ10A
SuperfamilyQ96MF6
Human Protein AtlasENSG00000135469
Peptide AtlasQ96MF6
HPRD08726
IPIIPI00065495   IPI00736624   IPI01022347   IPI01021944   IPI00152070   
Protein Interaction databases
DIP (DOE-UCLA)Q96MF6
IntAct (EBI)Q96MF6
FunCoupENSG00000135469
BioGRIDCOQ10A
STRING (EMBL)COQ10A
ZODIACCOQ10A
Ontologies - Pathways
QuickGOQ96MF6
Ontology : AmiGOmitochondrion  mitochondrial inner membrane  ubiquinone biosynthetic process  cellular respiration  ubiquinone binding  
Ontology : EGO-EBImitochondrion  mitochondrial inner membrane  ubiquinone biosynthetic process  cellular respiration  ubiquinone binding  
NDEx NetworkCOQ10A
Atlas of Cancer Signalling NetworkCOQ10A
Wikipedia pathwaysCOQ10A
Orthology - Evolution
OrthoDB93058
GeneTree (enSembl)ENSG00000135469
Phylogenetic Trees/Animal Genes : TreeFamCOQ10A
HOVERGENQ96MF6
HOGENOMQ96MF6
Homologs : HomoloGeneCOQ10A
Homology/Alignments : Family Browser (UCSC)COQ10A
Gene fusions - Rearrangements
Fusion : MitelmanCOQ10A/NABP2 [12q13.3/12q13.3]  
Fusion : MitelmanCOQ10A/USP5 [12q13.3/12p13.31]  [t(12;12)(p13;q13)]  
Fusion: TCGACOQ10A 12q13.3 OBFC2B KIRC
Fusion: TCGACOQ10A 12q13.3 USP5 12p13.31 GBM
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCOQ10A [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)COQ10A
dbVarCOQ10A
ClinVarCOQ10A
1000_GenomesCOQ10A 
Exome Variant ServerCOQ10A
ExAC (Exome Aggregation Consortium)COQ10A (select the gene name)
Genetic variants : HAPMAP93058
Genomic Variants (DGV)COQ10A [DGVbeta]
DECIPHERCOQ10A [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCOQ10A 
Mutations
ICGC Data PortalCOQ10A 
TCGA Data PortalCOQ10A 
Broad Tumor PortalCOQ10A
OASIS PortalCOQ10A [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCOQ10A  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDCOQ10A
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)MSeqDR-LSDB Mitochondrial Disease Locus Specific Database
BioMutasearch COQ10A
DgiDB (Drug Gene Interaction Database)COQ10A
DoCM (Curated mutations)COQ10A (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)COQ10A (select a term)
intoGenCOQ10A
Cancer3DCOQ10A(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenCOQ10A
Genetic Testing Registry COQ10A
NextProtQ96MF6 [Medical]
TSGene93058
GENETestsCOQ10A
Huge Navigator COQ10A [HugePedia]
snp3D : Map Gene to Disease93058
BioCentury BCIQCOQ10A
ClinGenCOQ10A
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD93058
Chemical/Pharm GKB GenePA143485439
Clinical trialCOQ10A
Miscellaneous
canSAR (ICR)COQ10A (select the gene name)
Probes
Litterature
PubMed17 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCOQ10A
EVEXCOQ10A
GoPubMedCOQ10A
iHOPCOQ10A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri May 19 12:11:27 CEST 2017

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