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COQ3 (coenzyme Q3, methyltransferase)

Identity

Alias_namescoenzyme Q3 homolog, methyltransferase (yeast)
coenzyme Q3 homolog, methyltransferase (S. cerevisiae)
Alias_symbol (synonym)bA9819.1
Other aliasDHHBMT
DHHBMTASE
UG0215E05
HGNC (Hugo) COQ3
LocusID (NCBI) 51805
Atlas_Id 62025
Location 6q16.2  [Link to chromosome band 6q16]
Location_base_pair Starts at 99369472 and ends at 99394206 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)COQ3   18175
Cards
Entrez_Gene (NCBI)COQ3  51805  coenzyme Q3, methyltransferase
AliasesDHHBMT; DHHBMTASE; UG0215E05; bA9819.1
GeneCards (Weizmann)COQ3
Ensembl hg19 (Hinxton)ENSG00000132423 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000132423 [Gene_View]  chr6:99369472-99394206 [Contig_View]  COQ3 [Vega]
ICGC DataPortalENSG00000132423
TCGA cBioPortalCOQ3
AceView (NCBI)COQ3
Genatlas (Paris)COQ3
WikiGenes51805
SOURCE (Princeton)COQ3
Genetics Home Reference (NIH)COQ3
Genomic and cartography
GoldenPath hg38 (UCSC)COQ3  -     chr6:99369472-99394206 -  6q16.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)COQ3  -     6q16.2   [Description]    (hg19-Feb_2009)
EnsemblCOQ3 - 6q16.2 [CytoView hg19]  COQ3 - 6q16.2 [CytoView hg38]
Mapping of homologs : NCBICOQ3 [Mapview hg19]  COQ3 [Mapview hg38]
OMIM605196   
Gene and transcription
Genbank (Entrez)AF193016 AF351615 AK056955 AL136726 BC001534
RefSeq transcript (Entrez)NM_017421
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)COQ3
Cluster EST : UnigeneHs.713623 [ NCBI ]
CGAP (NCI)Hs.713623
Alternative Splicing GalleryENSG00000132423
Gene ExpressionCOQ3 [ NCBI-GEO ]   COQ3 [ EBI - ARRAY_EXPRESS ]   COQ3 [ SEEK ]   COQ3 [ MEM ]
Gene Expression Viewer (FireBrowse)COQ3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)51805
GTEX Portal (Tissue expression)COQ3
Human Protein AtlasENSG00000132423-COQ3 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NZJ6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9NZJ6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9NZJ6
Splice isoforms : SwissVarQ9NZJ6
PhosPhoSitePlusQ9NZJ6
Domains : Interpro (EBI)SAM-dependent_MTases    UbiG_MeTrfase   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)COQ3
DMDM Disease mutations51805
Blocks (Seattle)COQ3
SuperfamilyQ9NZJ6
Human Protein Atlas [tissue]ENSG00000132423-COQ3 [tissue]
Peptide AtlasQ9NZJ6
HPRD07283
IPIIPI00418414   IPI00514903   
Protein Interaction databases
DIP (DOE-UCLA)Q9NZJ6
IntAct (EBI)Q9NZJ6
FunCoupENSG00000132423
BioGRIDCOQ3
STRING (EMBL)COQ3
ZODIACCOQ3
Ontologies - Pathways
QuickGOQ9NZJ6
Ontology : AmiGO###############################################################################################################################################################################################################################################################                              
Ontology : EGO-EBI###############################################################################################################################################################################################################################################################                              
Pathways : KEGGUbiquinone biosynthesis   
NDEx NetworkCOQ3
Atlas of Cancer Signalling NetworkCOQ3
Wikipedia pathwaysCOQ3
Orthology - Evolution
OrthoDB51805
GeneTree (enSembl)ENSG00000132423
Phylogenetic Trees/Animal Genes : TreeFamCOQ3
HOVERGENQ9NZJ6
HOGENOMQ9NZJ6
Homologs : HomoloGeneCOQ3
Homology/Alignments : Family Browser (UCSC)COQ3
Gene fusions - Rearrangements
Fusion : QuiverCOQ3
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCOQ3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)COQ3
dbVarCOQ3
ClinVarCOQ3
1000_GenomesCOQ3 
Exome Variant ServerCOQ3
ExAC (Exome Aggregation Consortium)ENSG00000132423
GNOMAD BrowserENSG00000132423
Genetic variants : HAPMAP51805
Genomic Variants (DGV)COQ3 [DGVbeta]
DECIPHERCOQ3 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCOQ3 
Mutations
ICGC Data PortalCOQ3 
TCGA Data PortalCOQ3 
Broad Tumor PortalCOQ3
OASIS PortalCOQ3 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCOQ3  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDCOQ3
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)MSeqDR-LSDB Mitochondrial Disease Locus Specific Database
BioMutasearch COQ3
DgiDB (Drug Gene Interaction Database)COQ3
DoCM (Curated mutations)COQ3 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)COQ3 (select a term)
intoGenCOQ3
Cancer3DCOQ3(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM605196   
Orphanet
DisGeNETCOQ3
MedgenCOQ3
Genetic Testing Registry COQ3
NextProtQ9NZJ6 [Medical]
TSGene51805
GENETestsCOQ3
Target ValidationCOQ3
Huge Navigator COQ3 [HugePedia]
snp3D : Map Gene to Disease51805
BioCentury BCIQCOQ3
ClinGenCOQ3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD51805
Chemical/Pharm GKB GenePA134934287
Clinical trialCOQ3
Miscellaneous
canSAR (ICR)COQ3 (select the gene name)
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCOQ3
EVEXCOQ3
GoPubMedCOQ3
iHOPCOQ3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri Feb 23 18:15:13 CET 2018

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