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COQ5 (coenzyme Q5, methyltransferase)

Identity

Alias_namescoenzyme Q5 homolog, methyltransferase (yeast)
coenzyme Q5 homolog, methyltransferase (S. cerevisiae)
Alias_symbol (synonym)MGC4767
Other alias-
HGNC (Hugo) COQ5
LocusID (NCBI) 84274
Atlas_Id 62027
Location 12q24.31  [Link to chromosome band 12q24]
Location_base_pair Starts at 120503279 and ends at 120529161 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
DYNLL1 (12q24.31) / COQ5 (12q24.31)TMC4 (19q13.42) / COQ5 (12q24.31)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)COQ5   28722
Cards
Entrez_Gene (NCBI)COQ5  84274  coenzyme Q5, methyltransferase
Aliases
GeneCards (Weizmann)COQ5
Ensembl hg19 (Hinxton)ENSG00000110871 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000110871 [Gene_View]  chr12:120503279-120529161 [Contig_View]  COQ5 [Vega]
ICGC DataPortalENSG00000110871
TCGA cBioPortalCOQ5
AceView (NCBI)COQ5
Genatlas (Paris)COQ5
WikiGenes84274
SOURCE (Princeton)COQ5
Genetics Home Reference (NIH)COQ5
Genomic and cartography
GoldenPath hg38 (UCSC)COQ5  -     chr12:120503279-120529161 -  12q24.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)COQ5  -     12q24.31   [Description]    (hg19-Feb_2009)
EnsemblCOQ5 - 12q24.31 [CytoView hg19]  COQ5 - 12q24.31 [CytoView hg38]
Mapping of homologs : NCBICOQ5 [Mapview hg19]  COQ5 [Mapview hg38]
OMIM616359   
Gene and transcription
Genbank (Entrez)AK057777 AK222610 AK225242 AK293656 AK298214
RefSeq transcript (Entrez)NM_032314
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)COQ5
Cluster EST : UnigeneHs.17250 [ NCBI ]
CGAP (NCI)Hs.17250
Alternative Splicing GalleryENSG00000110871
Gene ExpressionCOQ5 [ NCBI-GEO ]   COQ5 [ EBI - ARRAY_EXPRESS ]   COQ5 [ SEEK ]   COQ5 [ MEM ]
Gene Expression Viewer (FireBrowse)COQ5 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84274
GTEX Portal (Tissue expression)COQ5
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ5HYK3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ5HYK3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ5HYK3
Splice isoforms : SwissVarQ5HYK3
PhosPhoSitePlusQ5HYK3
Domaine pattern : Prosite (Expaxy)SAM_MT_UBIE (PS51608)    UBIE_1 (PS01183)    UBIE_2 (PS01184)   
Domains : Interpro (EBI)SAM-dependent_MTases    UbiE/COQ5_MeTrFase    UbiE/COQ5_MeTrFase_CS   
Domain families : Pfam (Sanger)Ubie_methyltran (PF01209)   
Domain families : Pfam (NCBI)pfam01209   
Conserved Domain (NCBI)COQ5
DMDM Disease mutations84274
Blocks (Seattle)COQ5
SuperfamilyQ5HYK3
Human Protein AtlasENSG00000110871
Peptide AtlasQ5HYK3
HPRD17560
IPIIPI00456965   IPI00742661   IPI00908347   IPI01022835   IPI01022966   IPI01021368   IPI01021492   
Protein Interaction databases
DIP (DOE-UCLA)Q5HYK3
IntAct (EBI)Q5HYK3
FunCoupENSG00000110871
BioGRIDCOQ5
STRING (EMBL)COQ5
ZODIACCOQ5
Ontologies - Pathways
QuickGOQ5HYK3
Ontology : AmiGOmitochondrial inner membrane  ubiquinone biosynthetic process  methylation  2-octaprenyl-6-methoxy-1,4-benzoquinone methylase activity  
Ontology : EGO-EBImitochondrial inner membrane  ubiquinone biosynthetic process  methylation  2-octaprenyl-6-methoxy-1,4-benzoquinone methylase activity  
Pathways : KEGGUbiquinone and other terpenoid-quinone biosynthesis   
NDEx NetworkCOQ5
Atlas of Cancer Signalling NetworkCOQ5
Wikipedia pathwaysCOQ5
Orthology - Evolution
OrthoDB84274
GeneTree (enSembl)ENSG00000110871
Phylogenetic Trees/Animal Genes : TreeFamCOQ5
HOVERGENQ5HYK3
HOGENOMQ5HYK3
Homologs : HomoloGeneCOQ5
Homology/Alignments : Family Browser (UCSC)COQ5
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCOQ5 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)COQ5
dbVarCOQ5
ClinVarCOQ5
1000_GenomesCOQ5 
Exome Variant ServerCOQ5
ExAC (Exome Aggregation Consortium)COQ5 (select the gene name)
Genetic variants : HAPMAP84274
Genomic Variants (DGV)COQ5 [DGVbeta]
DECIPHERCOQ5 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCOQ5 
Mutations
ICGC Data PortalCOQ5 
TCGA Data PortalCOQ5 
Broad Tumor PortalCOQ5
OASIS PortalCOQ5 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCOQ5  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDCOQ5
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)MSeqDR-LSDB Mitochondrial Disease Locus Specific Database
BioMutasearch COQ5
DgiDB (Drug Gene Interaction Database)COQ5
DoCM (Curated mutations)COQ5 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)COQ5 (select a term)
intoGenCOQ5
Cancer3DCOQ5(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM616359   
Orphanet
MedgenCOQ5
Genetic Testing Registry COQ5
NextProtQ5HYK3 [Medical]
TSGene84274
GENETestsCOQ5
Target ValidationCOQ5
Huge Navigator COQ5 [HugePedia]
snp3D : Map Gene to Disease84274
BioCentury BCIQCOQ5
ClinGenCOQ5
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD84274
Chemical/Pharm GKB GenePA143485438
Clinical trialCOQ5
Miscellaneous
canSAR (ICR)COQ5 (select the gene name)
Probes
Litterature
PubMed13 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCOQ5
EVEXCOQ5
GoPubMedCOQ5
iHOPCOQ5
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:05:14 CEST 2017

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