Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

COQ6 (coenzyme Q6, monooxygenase)

Identity

Alias_namescoenzyme Q6 homolog (yeast)
coenzyme Q6 homolog, monooxygenase (yeast)
coenzyme Q6 homolog, monooxygenase (S. cerevisiae)
coenzyme Q6 monooxygenase
Alias_symbol (synonym)CGI-10
Other aliasCGI10
COQ10D6
HGNC (Hugo) COQ6
LocusID (NCBI) 51004
Atlas_Id 62028
Location 14q24.3  [Link to chromosome band 14q24]
Location_base_pair Starts at 73950252 and ends at 73963110 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
COQ6 (14q24.3) / ACOT4 (14q24.3)COQ6 (14q24.3) / TBL1XR1 (3q26.32)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)COQ6   20233
Cards
Entrez_Gene (NCBI)COQ6  51004  coenzyme Q6, monooxygenase
AliasesCGI-10; CGI10; COQ10D6
GeneCards (Weizmann)COQ6
Ensembl hg19 (Hinxton)ENSG00000119723 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000119723 [Gene_View]  chr14:73950252-73963110 [Contig_View]  COQ6 [Vega]
ICGC DataPortalENSG00000119723
TCGA cBioPortalCOQ6
AceView (NCBI)COQ6
Genatlas (Paris)COQ6
WikiGenes51004
SOURCE (Princeton)COQ6
Genetics Home Reference (NIH)COQ6
Genomic and cartography
GoldenPath hg38 (UCSC)COQ6  -     chr14:73950252-73963110 +  14q24.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)COQ6  -     14q24.3   [Description]    (hg19-Feb_2009)
EnsemblCOQ6 - 14q24.3 [CytoView hg19]  COQ6 - 14q24.3 [CytoView hg38]
Mapping of homologs : NCBICOQ6 [Mapview hg19]  COQ6 [Mapview hg38]
OMIM614647   614650   
Gene and transcription
Genbank (Entrez)AF132944 AK130167 AK222965 AK294370 AK295517
RefSeq transcript (Entrez)NM_182476 NM_182480
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)COQ6
Cluster EST : UnigeneHs.131555 [ NCBI ]
CGAP (NCI)Hs.131555
Alternative Splicing GalleryENSG00000119723
Gene ExpressionCOQ6 [ NCBI-GEO ]   COQ6 [ EBI - ARRAY_EXPRESS ]   COQ6 [ SEEK ]   COQ6 [ MEM ]
Gene Expression Viewer (FireBrowse)COQ6 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)51004
GTEX Portal (Tissue expression)COQ6
Human Protein AtlasENSG00000119723-COQ6 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9Y2Z9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9Y2Z9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9Y2Z9
Splice isoforms : SwissVarQ9Y2Z9
PhosPhoSitePlusQ9Y2Z9
Domaine pattern : Prosite (Expaxy)UBIH (PS01304)   
Domains : Interpro (EBI)FAD-bd    FAD/NAD-binding_dom    Ubi_Hdrlase_CS    UbiH/COQ6    UbQ_mOase_COQ6   
Domain families : Pfam (Sanger)FAD_binding_3 (PF01494)   
Domain families : Pfam (NCBI)pfam01494   
Conserved Domain (NCBI)COQ6
DMDM Disease mutations51004
Blocks (Seattle)COQ6
SuperfamilyQ9Y2Z9
Human Protein Atlas [tissue]ENSG00000119723-COQ6 [tissue]
Peptide AtlasQ9Y2Z9
HPRD16742
IPIIPI00032633   IPI00922119   IPI00921939   IPI01025995   IPI01025561   IPI01025798   IPI01025437   IPI01025331   IPI01024975   IPI00922529   IPI01024939   IPI00922099   IPI01026589   IPI01026539   IPI01026211   IPI01026416   IPI00328619   
Protein Interaction databases
DIP (DOE-UCLA)Q9Y2Z9
IntAct (EBI)Q9Y2Z9
FunCoupENSG00000119723
BioGRIDCOQ6
STRING (EMBL)COQ6
ZODIACCOQ6
Ontologies - Pathways
QuickGOQ9Y2Z9
Ontology : AmiGOmitochondrion  mitochondrial inner membrane  Golgi apparatus  ubiquinone biosynthetic process  oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen  cell projection  oxidation-reduction process  FAD binding  
Ontology : EGO-EBImitochondrion  mitochondrial inner membrane  Golgi apparatus  ubiquinone biosynthetic process  oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen  cell projection  oxidation-reduction process  FAD binding  
Pathways : KEGGUbiquinone and other terpenoid-quinone biosynthesis   
NDEx NetworkCOQ6
Atlas of Cancer Signalling NetworkCOQ6
Wikipedia pathwaysCOQ6
Orthology - Evolution
OrthoDB51004
GeneTree (enSembl)ENSG00000119723
Phylogenetic Trees/Animal Genes : TreeFamCOQ6
HOVERGENQ9Y2Z9
HOGENOMQ9Y2Z9
Homologs : HomoloGeneCOQ6
Homology/Alignments : Family Browser (UCSC)COQ6
Gene fusions - Rearrangements
Fusion: Tumor Portal COQ6
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCOQ6 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)COQ6
dbVarCOQ6
ClinVarCOQ6
1000_GenomesCOQ6 
Exome Variant ServerCOQ6
ExAC (Exome Aggregation Consortium)ENSG00000119723
GNOMAD BrowserENSG00000119723
Genetic variants : HAPMAP51004
Genomic Variants (DGV)COQ6 [DGVbeta]
DECIPHERCOQ6 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCOQ6 
Mutations
ICGC Data PortalCOQ6 
TCGA Data PortalCOQ6 
Broad Tumor PortalCOQ6
OASIS PortalCOQ6 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCOQ6  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDCOQ6
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)MSeqDR-LSDB Mitochondrial Disease Locus Specific Database
BioMutasearch COQ6
DgiDB (Drug Gene Interaction Database)COQ6
DoCM (Curated mutations)COQ6 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)COQ6 (select a term)
intoGenCOQ6
Cancer3DCOQ6(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM614647    614650   
Orphanet20470    12482   
MedgenCOQ6
Genetic Testing Registry COQ6
NextProtQ9Y2Z9 [Medical]
TSGene51004
GENETestsCOQ6
Target ValidationCOQ6
Huge Navigator COQ6 [HugePedia]
snp3D : Map Gene to Disease51004
BioCentury BCIQCOQ6
ClinGenCOQ6
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD51004
Chemical/Pharm GKB GenePA134940980
Clinical trialCOQ6
Miscellaneous
canSAR (ICR)COQ6 (select the gene name)
Probes
Litterature
PubMed15 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCOQ6
EVEXCOQ6
GoPubMedCOQ6
iHOPCOQ6
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 11:43:12 CET 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.