Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

COX14 (COX14, cytochrome c oxidase assembly factor)

Identity

Other aliasC12orf62
PCAG1
HGNC (Hugo) COX14
LocusID (NCBI) 84987
Atlas_Id 56717
Location 12q13.12  [Link to chromosome band 12q13]
Location_base_pair Starts at 50505764 and ends at 50514240 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)COX14   28216
Cards
Entrez_Gene (NCBI)COX14  84987  COX14, cytochrome c oxidase assembly factor
AliasesC12orf62; PCAG1
GeneCards (Weizmann)COX14
Ensembl hg19 (Hinxton) [Gene_View]  chr12:50505764-50514240 [Contig_View]  COX14 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr12:50505764-50514240 [Contig_View]  COX14 [Vega]
TCGA cBioPortalCOX14
AceView (NCBI)COX14
Genatlas (Paris)COX14
WikiGenes84987
SOURCE (Princeton)COX14
Genetics Home Reference (NIH)COX14
Genomic and cartography
GoldenPath hg19 (UCSC)COX14  -     chr12:50505764-50514240 +  12q13.12   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)COX14  -     12q13.12   [Description]    (hg38-Dec_2013)
EnsemblCOX14 - 12q13.12 [CytoView hg19]  COX14 - 12q13.12 [CytoView hg38]
Mapping of homologs : NCBICOX14 [Mapview hg19]  COX14 [Mapview hg38]
OMIM220110   614478   
Gene and transcription
Genbank (Entrez)AI208662 AK312180 BC007849 BG829783 BP369305
RefSeq transcript (Entrez)NM_001257133 NM_001257134 NM_032901
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)COX14
Cluster EST : UnigeneHs.388645 [ NCBI ]
CGAP (NCI)Hs.388645
Gene ExpressionCOX14 [ NCBI-GEO ]   COX14 [ EBI - ARRAY_EXPRESS ]   COX14 [ SEEK ]   COX14 [ MEM ]
Gene Expression Viewer (FireBrowse)COX14 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84987
GTEX Portal (Tissue expression)COX14
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96I36   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96I36  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96I36
Splice isoforms : SwissVarQ96I36
PhosPhoSitePlusQ96I36
Domains : Interpro (EBI)COX14   
Domain families : Pfam (Sanger)COX14 (PF14880)   
Domain families : Pfam (NCBI)pfam14880   
Conserved Domain (NCBI)COX14
DMDM Disease mutations84987
Blocks (Seattle)COX14
SuperfamilyQ96I36
Peptide AtlasQ96I36
IPIIPI00176708   
Protein Interaction databases
DIP (DOE-UCLA)Q96I36
IntAct (EBI)Q96I36
BioGRIDCOX14
STRING (EMBL)COX14
ZODIACCOX14
Ontologies - Pathways
QuickGOQ96I36
Ontology : AmiGOmitochondrion  integral component of membrane  mitochondrial membrane  mitochondrial respiratory chain complex IV assembly  mitochondrial respiratory chain complex IV assembly  
Ontology : EGO-EBImitochondrion  integral component of membrane  mitochondrial membrane  mitochondrial respiratory chain complex IV assembly  mitochondrial respiratory chain complex IV assembly  
NDEx NetworkCOX14
Atlas of Cancer Signalling NetworkCOX14
Wikipedia pathwaysCOX14
Orthology - Evolution
OrthoDB84987
Phylogenetic Trees/Animal Genes : TreeFamCOX14
HOVERGENQ96I36
HOGENOMQ96I36
Homologs : HomoloGeneCOX14
Homology/Alignments : Family Browser (UCSC)COX14
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCOX14 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)COX14
dbVarCOX14
ClinVarCOX14
1000_GenomesCOX14 
Exome Variant ServerCOX14
ExAC (Exome Aggregation Consortium)COX14 (select the gene name)
Genetic variants : HAPMAP84987
Genomic Variants (DGV)COX14 [DGVbeta]
DECIPHER (Syndromes)12:50505764-50514240  
CONAN: Copy Number AnalysisCOX14 
Mutations
ICGC Data PortalCOX14 
TCGA Data PortalCOX14 
Broad Tumor PortalCOX14
OASIS PortalCOX14 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDCOX14
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch COX14
DgiDB (Drug Gene Interaction Database)COX14
DoCM (Curated mutations)COX14 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)COX14 (select a term)
intoGenCOX14
Cancer3DCOX14(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM220110    614478   
Orphanet
MedgenCOX14
Genetic Testing Registry COX14
NextProtQ96I36 [Medical]
TSGene84987
GENETestsCOX14
Huge Navigator COX14 [HugePedia]
snp3D : Map Gene to Disease84987
BioCentury BCIQCOX14
ClinGenCOX14
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD84987
Chemical/Pharm GKB GenePA143485391
Clinical trialCOX14
Miscellaneous
canSAR (ICR)COX14 (select the gene name)
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCOX14
EVEXCOX14
GoPubMedCOX14
iHOPCOX14
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 13:01:25 CET 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.