Atlas of Genetics and Cytogenetics in Oncology and Haematology

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COX15 (cytochrome c oxidase assembly homolog 15 (yeast))

Identity

Other names-
HGNC (Hugo) COX15
LocusID (NCBI) 1355
Location 10q24.2
Location_base_pair Starts at 101468505 and ends at 101492423 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)COX15   2263
Entrez_Gene (NCBI)COX15  1355  cytochrome c oxidase assembly homolog 15 (yeast)
Cards
GeneCards (Weizmann)COX15
Ensembl (Hinxton)ENSG00000014919 [Gene_View]  chr10:101468505-101492423 [Contig_View]  COX15 [Vega]
AceView (NCBI)COX15
Genatlas (Paris)COX15
SOURCE (Stanford)NM_004376 NM_078470
Genomic and cartography
GoldenPath (UCSC)COX15  -  10q24.2   chr10:101468505-101492423 -  10q24.2   [Description]    (hg19-Feb_2009)
EnsemblCOX15 - 10q24.2 [CytoView]
Mapping of homologs : NCBICOX15 [Mapview]
OMIM256000   603646   
Gene and transcription
Genbank (Entrez)AF026850 AF044323 AK291654 AK298864 BC002382
RefSeq transcript (SRS)NM_004376 NM_078470
RefSeq transcript (Entrez)NM_004376 NM_078470
RefSeq genomic (SRS)AC_000142 NC_000010 NC_018921 NG_008986 NT_030059 NW_001838006 NW_004078068
RefSeq genomic (Entrez)AC_000142 NC_000010 NC_018921 NG_008986 NT_030059 NW_001838006 NW_004078068
Consensus coding sequences : CCDS (NCBI)COX15
Cluster EST : UnigeneHs.28326 [ SRS ] Hs.28326 [ NCBI ]
CGAP (NCI)Hs.28326
Alternative Splicing : Fast-db (Paris)GSHG0004305
Alternative Splicing GalleryENSG00000014919
Gene ExpressionCOX15 [ NCBI-GEO ]   COX15 [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ7KZN9 (SRS) Q7KZN9 (Uniprot)
NextProtQ7KZN9
With graphics : InterProQ7KZN9
Splice isoforms : SwissVarQ7KZN9(Swissvar)
Domains : Interpro (SRS)HemeA_syn    HemeA_Synthase_type2    Pept_cys/ser_Trypsin-like   
Domains : Interpro (EBI)HemeA_syn    HemeA_Synthase_type2    Pept_cys/ser_Trypsin-like   
Related proteins : CluSTrQ7KZN9
Domain families : Pfam (SRS)COX15-CtaA (PF02628)   
Domain families : Pfam (Sanger)COX15-CtaA (PF02628)   
Domain families : Pfam (NCBI)pfam02628   
DMDM1355
Blocks (Seattle)Q7KZN9
Human Protein AtlasENSG00000014919
HPRD04707
IPIIPI00419869   IPI00455190   
Protein Interaction databases
DIP (DOE-UCLA)Q7KZN9
IntAct (EBI)Q7KZN9
FunCoupENSG00000014919
REACTOMECOX15
Protein Interaction Database1355
BioGRIDCOX15
InParanoidQ7KZN9
Interologous Interaction database Q7KZN9
IntegromeDBCOX15
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)COX15
SNP (GeneSNP Utah)COX15
SNP : HGBaseCOX15
Genetic variants : HAPMAPCOX15
Somatic Mutations in Cancer : COSMICCOX15 
CONAN: Copy Number AnalysisCOX15 
Mutations and Diseases : HGMDCOX15
OMIM256000    603646   
GENETests256000    603646   
Disease Genetic AssociationCOX15
Huge Navigator COX15 [HugePedia]  COX15 [HugeCancerGEM]
Genomic VariantsCOX15  COX15 [DGVbeta]
snp3D : Map Gene to Disease1355
General knowledge
Homologs : HomoloGeneCOX15
Homology/Alignments : Family Browser (UCSC)COX15
Phylogenetic Trees/Animal Genes : TreeFamCOX15
Chemical/Protein Interactions : CTD1355
Chemical/Pharm GKB GenePA26779
Clinical trialCOX15
Cancer Resource (Charite)ENSG00000014919
Ontology : AmiGOcytochrome-c oxidase activity  cytochrome-c oxidase activity  mitochondrial respiratory chain  mitochondrial electron transport, cytochrome c to oxygen  heme a biosynthetic process  heme a biosynthetic process  respiratory gaseous exchange  respiratory chain complex IV assembly  integral to membrane  oxidoreductase activity, acting on the CH-CH group of donors  mitochondrial part  cellular respiration  oxidation-reduction process  
Ontology : EGO-EBIcytochrome-c oxidase activity  cytochrome-c oxidase activity  mitochondrial respiratory chain  mitochondrial electron transport, cytochrome c to oxygen  heme a biosynthetic process  heme a biosynthetic process  respiratory gaseous exchange  respiratory chain complex IV assembly  integral to membrane  oxidoreductase activity, acting on the CH-CH group of donors  mitochondrial part  cellular respiration  oxidation-reduction process  
Pathways : KEGGOxidative phosphorylation
Other databases
Probes
Litterature
PubMed19 Pubmed reference(s) in Entrez
PubGeneCOX15
iHOPCOX15
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 1 12:28:17 CEST 2013
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