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COX7C (cytochrome c oxidase subunit 7C)

Identity

Alias_namescytochrome c oxidase subunit VIIc
Other alias-
HGNC (Hugo) COX7C
LocusID (NCBI) 1350
Atlas_Id 62042
Location 5q14.3  [Link to chromosome band 5q14]
Location_base_pair Starts at 86617967 and ends at 86620766 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)COX7C   2292
Cards
Entrez_Gene (NCBI)COX7C  1350  cytochrome c oxidase subunit 7C
Aliases
GeneCards (Weizmann)COX7C
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr5:86617967-86620766 [Contig_View]  COX7C [Vega]
TCGA cBioPortalCOX7C
AceView (NCBI)COX7C
Genatlas (Paris)COX7C
WikiGenes1350
SOURCE (Princeton)COX7C
Genetics Home Reference (NIH)COX7C
Genomic and cartography
GoldenPath hg38 (UCSC)COX7C  -     chr5:86617967-86620766 +  5q14.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)COX7C  -     5q14.3   [Description]    (hg19-Feb_2009)
EnsemblCOX7C - 5q14.3 [CytoView hg19]  COX7C - 5q14.3 [CytoView hg38]
Mapping of homologs : NCBICOX7C [Mapview hg19]  COX7C [Mapview hg38]
OMIM603774   
Gene and transcription
Genbank (Entrez)AK026505 AK309192 BC001005 BC007498 BT007098
RefSeq transcript (Entrez)NM_001867
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)COX7C
Cluster EST : UnigeneHs.430075 [ NCBI ]
CGAP (NCI)Hs.430075
Gene ExpressionCOX7C [ NCBI-GEO ]   COX7C [ EBI - ARRAY_EXPRESS ]   COX7C [ SEEK ]   COX7C [ MEM ]
Gene Expression Viewer (FireBrowse)COX7C [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)1350
GTEX Portal (Tissue expression)COX7C
Protein : pattern, domain, 3D structure
UniProt/SwissProtP15954   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP15954  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP15954
Splice isoforms : SwissVarP15954
PhosPhoSitePlusP15954
Domains : Interpro (EBI)COX7C/Cox8   
Domain families : Pfam (Sanger)COX7C (PF02935)   
Domain families : Pfam (NCBI)pfam02935   
Conserved Domain (NCBI)COX7C
DMDM Disease mutations1350
Blocks (Seattle)COX7C
SuperfamilyP15954
Peptide AtlasP15954
HPRD04800
IPIIPI00013968   IPI00967916   
Protein Interaction databases
DIP (DOE-UCLA)P15954
IntAct (EBI)P15954
BioGRIDCOX7C
STRING (EMBL)COX7C
ZODIACCOX7C
Ontologies - Pathways
QuickGOP15954
Ontology : AmiGOcytochrome-c oxidase activity  mitochondrion  mitochondrial inner membrane  mitochondrial respiratory chain complex IV  generation of precursor metabolites and energy  mitochondrial electron transport, cytochrome c to oxygen  mitochondrial electron transport, cytochrome c to oxygen  integral component of membrane  hydrogen ion transmembrane transport  
Ontology : EGO-EBIcytochrome-c oxidase activity  mitochondrion  mitochondrial inner membrane  mitochondrial respiratory chain complex IV  generation of precursor metabolites and energy  mitochondrial electron transport, cytochrome c to oxygen  mitochondrial electron transport, cytochrome c to oxygen  integral component of membrane  hydrogen ion transmembrane transport  
Pathways : KEGGOxidative phosphorylation    Cardiac muscle contraction    Non-alcoholic fatty liver disease (NAFLD)    Alzheimer's disease    Parkinson's disease    Huntington's disease   
NDEx NetworkCOX7C
Atlas of Cancer Signalling NetworkCOX7C
Wikipedia pathwaysCOX7C
Orthology - Evolution
OrthoDB1350
Phylogenetic Trees/Animal Genes : TreeFamCOX7C
HOVERGENP15954
HOGENOMP15954
Homologs : HomoloGeneCOX7C
Homology/Alignments : Family Browser (UCSC)COX7C
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCOX7C [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)COX7C
dbVarCOX7C
ClinVarCOX7C
1000_GenomesCOX7C 
Exome Variant ServerCOX7C
ExAC (Exome Aggregation Consortium)COX7C (select the gene name)
Genetic variants : HAPMAP1350
Genomic Variants (DGV)COX7C [DGVbeta]
DECIPHERCOX7C [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCOX7C 
Mutations
ICGC Data PortalCOX7C 
TCGA Data PortalCOX7C 
Broad Tumor PortalCOX7C
OASIS PortalCOX7C [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCOX7C  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDCOX7C
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)MSeqDR-LSDB Mitochondrial Disease Locus Specific Database
BioMutasearch COX7C
DgiDB (Drug Gene Interaction Database)COX7C
DoCM (Curated mutations)COX7C (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)COX7C (select a term)
intoGenCOX7C
Cancer3DCOX7C(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM603774   
Orphanet
MedgenCOX7C
Genetic Testing Registry COX7C
NextProtP15954 [Medical]
TSGene1350
GENETestsCOX7C
Target ValidationCOX7C
Huge Navigator COX7C [HugePedia]
snp3D : Map Gene to Disease1350
BioCentury BCIQCOX7C
ClinGenCOX7C
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD1350
Chemical/Pharm GKB GenePA26812
Clinical trialCOX7C
Miscellaneous
canSAR (ICR)COX7C (select the gene name)
Probes
Litterature
PubMed13 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCOX7C
EVEXCOX7C
GoPubMedCOX7C
iHOPCOX7C
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Aug 1 16:12:44 CEST 2017

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