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COX8C (cytochrome c oxidase subunit 8C)

Identity

Alias_namescytochrome c oxidase subunit VIIIC
Alias_symbol (synonym)COX8-3
Other alias
HGNC (Hugo) COX8C
LocusID (NCBI) 341947
Atlas_Id 46696
Location 14q32.12  [Link to chromosome band 14q32]
Location_base_pair Starts at 93347191 and ends at 93348354 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)COX8C   24382
Cards
Entrez_Gene (NCBI)COX8C  341947  cytochrome c oxidase subunit 8C
AliasesCOX8-3
GeneCards (Weizmann)COX8C
Ensembl hg19 (Hinxton)ENSG00000187581 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000187581 [Gene_View]  chr14:93347191-93348354 [Contig_View]  COX8C [Vega]
ICGC DataPortalENSG00000187581
TCGA cBioPortalCOX8C
AceView (NCBI)COX8C
Genatlas (Paris)COX8C
WikiGenes341947
SOURCE (Princeton)COX8C
Genetics Home Reference (NIH)COX8C
Genomic and cartography
GoldenPath hg38 (UCSC)COX8C  -     chr14:93347191-93348354 +  14q32.12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)COX8C  -     14q32.12   [Description]    (hg19-Feb_2009)
EnsemblCOX8C - 14q32.12 [CytoView hg19]  COX8C - 14q32.12 [CytoView hg38]
Mapping of homologs : NCBICOX8C [Mapview hg19]  COX8C [Mapview hg38]
OMIM616855   
Gene and transcription
Genbank (Entrez)AY161004 BC101125 BC101126
RefSeq transcript (Entrez)NM_182971
RefSeq genomic (Entrez)NC_000014 NC_018925 NG_051662 NT_187601
Consensus coding sequences : CCDS (NCBI)COX8C
Cluster EST : UnigeneHs.666459 [ NCBI ]
CGAP (NCI)Hs.666459
Alternative Splicing GalleryENSG00000187581
Gene ExpressionCOX8C [ NCBI-GEO ]   COX8C [ EBI - ARRAY_EXPRESS ]   COX8C [ SEEK ]   COX8C [ MEM ]
Gene Expression Viewer (FireBrowse)COX8C [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)341947
GTEX Portal (Tissue expression)COX8C
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ7Z4L0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ7Z4L0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ7Z4L0
Splice isoforms : SwissVarQ7Z4L0
PhosPhoSitePlusQ7Z4L0
Domains : Interpro (EBI)Cyt_c_oxidase_su8    Cyt_c_oxidase_su8/PSI_RC_su9   
Domain families : Pfam (Sanger)COX8 (PF02285)   
Domain families : Pfam (NCBI)pfam02285   
Conserved Domain (NCBI)COX8C
DMDM Disease mutations341947
Blocks (Seattle)COX8C
SuperfamilyQ7Z4L0
Human Protein AtlasENSG00000187581
Peptide AtlasQ7Z4L0
HPRD13090
IPIIPI00376004   
Protein Interaction databases
DIP (DOE-UCLA)Q7Z4L0
IntAct (EBI)Q7Z4L0
FunCoupENSG00000187581
BioGRIDCOX8C
STRING (EMBL)COX8C
ZODIACCOX8C
Ontologies - Pathways
QuickGOQ7Z4L0
Ontology : AmiGOcytochrome-c oxidase activity  mitochondrion  mitochondrial respiratory chain complex IV  mitochondrial electron transport, cytochrome c to oxygen  integral component of membrane  hydrogen ion transmembrane transport  
Ontology : EGO-EBIcytochrome-c oxidase activity  mitochondrion  mitochondrial respiratory chain complex IV  mitochondrial electron transport, cytochrome c to oxygen  integral component of membrane  hydrogen ion transmembrane transport  
Pathways : KEGGOxidative phosphorylation    Cardiac muscle contraction    Non-alcoholic fatty liver disease (NAFLD)    Alzheimer's disease    Parkinson's disease    Huntington's disease   
NDEx NetworkCOX8C
Atlas of Cancer Signalling NetworkCOX8C
Wikipedia pathwaysCOX8C
Orthology - Evolution
OrthoDB341947
GeneTree (enSembl)ENSG00000187581
Phylogenetic Trees/Animal Genes : TreeFamCOX8C
HOVERGENQ7Z4L0
HOGENOMQ7Z4L0
Homologs : HomoloGeneCOX8C
Homology/Alignments : Family Browser (UCSC)COX8C
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCOX8C [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)COX8C
dbVarCOX8C
ClinVarCOX8C
1000_GenomesCOX8C 
Exome Variant ServerCOX8C
ExAC (Exome Aggregation Consortium)COX8C (select the gene name)
Genetic variants : HAPMAP341947
Genomic Variants (DGV)COX8C [DGVbeta]
DECIPHERCOX8C [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCOX8C 
Mutations
ICGC Data PortalCOX8C 
TCGA Data PortalCOX8C 
Broad Tumor PortalCOX8C
OASIS PortalCOX8C [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCOX8C  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDCOX8C
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)MSeqDR-LSDB Mitochondrial Disease Locus Specific Database
BioMutasearch COX8C
DgiDB (Drug Gene Interaction Database)COX8C
DoCM (Curated mutations)COX8C (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)COX8C (select a term)
intoGenCOX8C
Cancer3DCOX8C(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM616855   
Orphanet
MedgenCOX8C
Genetic Testing Registry COX8C
NextProtQ7Z4L0 [Medical]
TSGene341947
GENETestsCOX8C
Huge Navigator COX8C [HugePedia]
snp3D : Map Gene to Disease341947
BioCentury BCIQCOX8C
ClinGenCOX8C
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD341947
Chemical/Pharm GKB GenePA134909890
Clinical trialCOX8C
Miscellaneous
canSAR (ICR)COX8C (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCOX8C
EVEXCOX8C
GoPubMedCOX8C
iHOPCOX8C
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri May 19 12:11:34 CEST 2017

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