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CPA2 (carboxypeptidase A2)

Identity

Alias_namescarboxypeptidase A2 (pancreatic)
Other alias-
HGNC (Hugo) CPA2
LocusID (NCBI) 1358
Atlas_Id 62044
Location 7q32.2  [Link to chromosome band 7q32]
Location_base_pair Starts at 130266863 and ends at 130289797 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CPA2   2297
Cards
Entrez_Gene (NCBI)CPA2  1358  carboxypeptidase A2
Aliases
GeneCards (Weizmann)CPA2
Ensembl hg19 (Hinxton)ENSG00000158516 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000158516 [Gene_View]  chr7:130266863-130289797 [Contig_View]  CPA2 [Vega]
ICGC DataPortalENSG00000158516
TCGA cBioPortalCPA2
AceView (NCBI)CPA2
Genatlas (Paris)CPA2
WikiGenes1358
SOURCE (Princeton)CPA2
Genetics Home Reference (NIH)CPA2
Genomic and cartography
GoldenPath hg38 (UCSC)CPA2  -     chr7:130266863-130289797 +  7q32.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CPA2  -     7q32.2   [Description]    (hg19-Feb_2009)
EnsemblCPA2 - 7q32.2 [CytoView hg19]  CPA2 - 7q32.2 [CytoView hg38]
Mapping of homologs : NCBICPA2 [Mapview hg19]  CPA2 [Mapview hg38]
OMIM600688   
Gene and transcription
Genbank (Entrez)AK293378 BC007009 BC014571 BC015140 BT007403
RefSeq transcript (Entrez)NM_001869
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CPA2
Cluster EST : UnigeneHs.490038 [ NCBI ]
CGAP (NCI)Hs.490038
Alternative Splicing GalleryENSG00000158516
Gene ExpressionCPA2 [ NCBI-GEO ]   CPA2 [ EBI - ARRAY_EXPRESS ]   CPA2 [ SEEK ]   CPA2 [ MEM ]
Gene Expression Viewer (FireBrowse)CPA2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)1358
GTEX Portal (Tissue expression)CPA2
Protein : pattern, domain, 3D structure
UniProt/SwissProtP48052   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP48052  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP48052
Splice isoforms : SwissVarP48052
Catalytic activity : Enzyme3.4.17.15 [ Enzyme-Expasy ]   3.4.17.153.4.17.15 [ IntEnz-EBI ]   3.4.17.15 [ BRENDA ]   3.4.17.15 [ KEGG ]   
PhosPhoSitePlusP48052
Domaine pattern : Prosite (Expaxy)CARBOXYPEPT_ZN_1 (PS00132)    CARBOXYPEPT_ZN_2 (PS00133)   
Domains : Interpro (EBI)CPA_M14_CPD    M14A_act_pep    Peptidase_M14    Propept_inh   
Domain families : Pfam (Sanger)Peptidase_M14 (PF00246)    Propep_M14 (PF02244)   
Domain families : Pfam (NCBI)pfam00246    pfam02244   
Domain families : Smart (EMBL)Zn_pept (SM00631)  
Conserved Domain (NCBI)CPA2
DMDM Disease mutations1358
Blocks (Seattle)CPA2
PDB (SRS)1AYE    1DTD    1O6X   
PDB (PDBSum)1AYE    1DTD    1O6X   
PDB (IMB)1AYE    1DTD    1O6X   
PDB (RSDB)1AYE    1DTD    1O6X   
Structural Biology KnowledgeBase1AYE    1DTD    1O6X   
SCOP (Structural Classification of Proteins)1AYE    1DTD    1O6X   
CATH (Classification of proteins structures)1AYE    1DTD    1O6X   
SuperfamilyP48052
Human Protein AtlasENSG00000158516
Peptide AtlasP48052
HPRD02821
IPIIPI00941312   IPI00909274   IPI00926772   
Protein Interaction databases
DIP (DOE-UCLA)P48052
IntAct (EBI)P48052
FunCoupENSG00000158516
BioGRIDCPA2
STRING (EMBL)CPA2
ZODIACCPA2
Ontologies - Pathways
QuickGOP48052
Ontology : AmiGOcarboxypeptidase activity  metallocarboxypeptidase activity  extracellular region  extracellular space  vacuole  proteolysis  protein catabolic process in the vacuole  zinc ion binding  
Ontology : EGO-EBIcarboxypeptidase activity  metallocarboxypeptidase activity  extracellular region  extracellular space  vacuole  proteolysis  protein catabolic process in the vacuole  zinc ion binding  
Pathways : KEGGPancreatic secretion    Protein digestion and absorption   
NDEx NetworkCPA2
Atlas of Cancer Signalling NetworkCPA2
Wikipedia pathwaysCPA2
Orthology - Evolution
OrthoDB1358
GeneTree (enSembl)ENSG00000158516
Phylogenetic Trees/Animal Genes : TreeFamCPA2
HOVERGENP48052
HOGENOMP48052
Homologs : HomoloGeneCPA2
Homology/Alignments : Family Browser (UCSC)CPA2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCPA2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CPA2
dbVarCPA2
ClinVarCPA2
1000_GenomesCPA2 
Exome Variant ServerCPA2
ExAC (Exome Aggregation Consortium)CPA2 (select the gene name)
Genetic variants : HAPMAP1358
Genomic Variants (DGV)CPA2 [DGVbeta]
DECIPHERCPA2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCPA2 
Mutations
ICGC Data PortalCPA2 
TCGA Data PortalCPA2 
Broad Tumor PortalCPA2
OASIS PortalCPA2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCPA2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDCPA2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch CPA2
DgiDB (Drug Gene Interaction Database)CPA2
DoCM (Curated mutations)CPA2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CPA2 (select a term)
intoGenCPA2
Cancer3DCPA2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM600688   
Orphanet
MedgenCPA2
Genetic Testing Registry CPA2
NextProtP48052 [Medical]
TSGene1358
GENETestsCPA2
Target ValidationCPA2
Huge Navigator CPA2 [HugePedia]
snp3D : Map Gene to Disease1358
BioCentury BCIQCPA2
ClinGenCPA2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD1358
Chemical/Pharm GKB GenePA26817
Clinical trialCPA2
Miscellaneous
canSAR (ICR)CPA2 (select the gene name)
Probes
Litterature
PubMed21 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCPA2
EVEXCPA2
GoPubMedCPA2
iHOPCPA2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:44:23 CEST 2017

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