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CPA5 (carboxypeptidase A5)

Identity

Other alias-
HGNC (Hugo) CPA5
LocusID (NCBI) 93979
Atlas_Id 62046
Location 7q32.2  [Link to chromosome band 7q32]
Location_base_pair Starts at 130344790 and ends at 130368728 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CPA5   15722
Cards
Entrez_Gene (NCBI)CPA5  93979  carboxypeptidase A5
Aliases
GeneCards (Weizmann)CPA5
Ensembl hg19 (Hinxton)ENSG00000158525 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000158525 [Gene_View]  chr7:130344790-130368728 [Contig_View]  CPA5 [Vega]
ICGC DataPortalENSG00000158525
TCGA cBioPortalCPA5
AceView (NCBI)CPA5
Genatlas (Paris)CPA5
WikiGenes93979
SOURCE (Princeton)CPA5
Genetics Home Reference (NIH)CPA5
Genomic and cartography
GoldenPath hg38 (UCSC)CPA5  -     chr7:130344790-130368728 +  7q32.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CPA5  -     7q32.2   [Description]    (hg19-Feb_2009)
EnsemblCPA5 - 7q32.2 [CytoView hg19]  CPA5 - 7q32.2 [CytoView hg38]
Mapping of homologs : NCBICPA5 [Mapview hg19]  CPA5 [Mapview hg38]
OMIM609561   
Gene and transcription
Genbank (Entrez)AF384667 AK093288 AK131191 AK315256 AY155228
RefSeq transcript (Entrez)NM_001127441 NM_001127442 NM_001318223 NM_080385
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CPA5
Cluster EST : UnigeneHs.567642 [ NCBI ]
CGAP (NCI)Hs.567642
Alternative Splicing GalleryENSG00000158525
Gene ExpressionCPA5 [ NCBI-GEO ]   CPA5 [ EBI - ARRAY_EXPRESS ]   CPA5 [ SEEK ]   CPA5 [ MEM ]
Gene Expression Viewer (FireBrowse)CPA5 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)93979
GTEX Portal (Tissue expression)CPA5
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8WXQ8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8WXQ8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8WXQ8
Splice isoforms : SwissVarQ8WXQ8
Catalytic activity : Enzyme3.4.17.- [ Enzyme-Expasy ]   3.4.17.-3.4.17.- [ IntEnz-EBI ]   3.4.17.- [ BRENDA ]   3.4.17.- [ KEGG ]   
PhosPhoSitePlusQ8WXQ8
Domaine pattern : Prosite (Expaxy)CARBOXYPEPT_ZN_1 (PS00132)    CARBOXYPEPT_ZN_2 (PS00133)   
Domains : Interpro (EBI)M14A_act_pep    Peptidase_M14    Propept_inh   
Domain families : Pfam (Sanger)Peptidase_M14 (PF00246)    Propep_M14 (PF02244)   
Domain families : Pfam (NCBI)pfam00246    pfam02244   
Domain families : Smart (EMBL)Zn_pept (SM00631)  
Conserved Domain (NCBI)CPA5
DMDM Disease mutations93979
Blocks (Seattle)CPA5
SuperfamilyQ8WXQ8
Human Protein AtlasENSG00000158525
Peptide AtlasQ8WXQ8
HPRD07097
IPIIPI00103586   IPI00384440   IPI00945149   IPI00946985   IPI00947274   IPI00945984   
Protein Interaction databases
DIP (DOE-UCLA)Q8WXQ8
IntAct (EBI)Q8WXQ8
FunCoupENSG00000158525
BioGRIDCPA5
STRING (EMBL)CPA5
ZODIACCPA5
Ontologies - Pathways
QuickGOQ8WXQ8
Ontology : AmiGOmetallocarboxypeptidase activity  extracellular space  proteolysis  zinc ion binding  
Ontology : EGO-EBImetallocarboxypeptidase activity  extracellular space  proteolysis  zinc ion binding  
NDEx NetworkCPA5
Atlas of Cancer Signalling NetworkCPA5
Wikipedia pathwaysCPA5
Orthology - Evolution
OrthoDB93979
GeneTree (enSembl)ENSG00000158525
Phylogenetic Trees/Animal Genes : TreeFamCPA5
HOVERGENQ8WXQ8
HOGENOMQ8WXQ8
Homologs : HomoloGeneCPA5
Homology/Alignments : Family Browser (UCSC)CPA5
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCPA5 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CPA5
dbVarCPA5
ClinVarCPA5
1000_GenomesCPA5 
Exome Variant ServerCPA5
ExAC (Exome Aggregation Consortium)CPA5 (select the gene name)
Genetic variants : HAPMAP93979
Genomic Variants (DGV)CPA5 [DGVbeta]
DECIPHERCPA5 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCPA5 
Mutations
ICGC Data PortalCPA5 
TCGA Data PortalCPA5 
Broad Tumor PortalCPA5
OASIS PortalCPA5 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCPA5  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDCPA5
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch CPA5
DgiDB (Drug Gene Interaction Database)CPA5
DoCM (Curated mutations)CPA5 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CPA5 (select a term)
intoGenCPA5
Cancer3DCPA5(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM609561   
Orphanet
MedgenCPA5
Genetic Testing Registry CPA5
NextProtQ8WXQ8 [Medical]
TSGene93979
GENETestsCPA5
Target ValidationCPA5
Huge Navigator CPA5 [HugePedia]
snp3D : Map Gene to Disease93979
BioCentury BCIQCPA5
ClinGenCPA5
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD93979
Chemical/Pharm GKB GenePA26820
Clinical trialCPA5
Miscellaneous
canSAR (ICR)CPA5 (select the gene name)
Probes
Litterature
PubMed11 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCPA5
EVEXCPA5
GoPubMedCPA5
iHOPCPA5
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:05:17 CEST 2017

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