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CPAMD8 (C3 and PZP like alpha-2-macroglobulin domain containing 8)

Identity

Alias (NCBI)ASGD8
K-CAP
VIP
HGNC (Hugo) CPAMD8
HGNC Alias symbKIAA1283
VIP
K-CAP
LocusID (NCBI) 27151
Atlas_Id 62047
Location 19p13.11  [Link to chromosome band 19p13]
Location_base_pair Starts at 16892951 and ends at 17026810 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
CHERP (19p13.11)::CPAMD8 (19p13.11)CPAMD8 (19p13.11)::HAUS8 (19p13.11)HOOK2 (19p13.2)::CPAMD8 (19p13.11)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)CPAMD8   23228
Cards
Entrez_Gene (NCBI)CPAMD8    C3 and PZP like alpha-2-macroglobulin domain containing 8
AliasesASGD8; K-CAP; VIP
GeneCards (Weizmann)CPAMD8
Ensembl hg19 (Hinxton)ENSG00000160111 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000160111 [Gene_View]  ENSG00000160111 [Sequence]  chr19:16892951-17026810 [Contig_View]  CPAMD8 [Vega]
ICGC DataPortalENSG00000160111
TCGA cBioPortalCPAMD8
AceView (NCBI)CPAMD8
Genatlas (Paris)CPAMD8
SOURCE (Princeton)CPAMD8
Genetics Home Reference (NIH)CPAMD8
Genomic and cartography
GoldenPath hg38 (UCSC)CPAMD8  -     chr19:16892951-17026810 -  19p13.11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CPAMD8  -     19p13.11   [Description]    (hg19-Feb_2009)
GoldenPathCPAMD8 - 19p13.11 [CytoView hg19]  CPAMD8 - 19p13.11 [CytoView hg38]
ImmunoBaseENSG00000160111
Genome Data Viewer NCBICPAMD8 [Mapview hg19]  
OMIM608841   617319   
Gene and transcription
Genbank (Entrez)AB033109 AI670110 AK075099 AK092632 AK124052
RefSeq transcript (Entrez)NM_015692
Consensus coding sequences : CCDS (NCBI)CPAMD8
Gene ExpressionCPAMD8 [ NCBI-GEO ]   CPAMD8 [ EBI - ARRAY_EXPRESS ]   CPAMD8 [ SEEK ]   CPAMD8 [ MEM ]
Gene Expression Viewer (FireBrowse)CPAMD8 [ Firebrowse - Broad ]
GenevisibleExpression of CPAMD8 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)27151
GTEX Portal (Tissue expression)CPAMD8
Human Protein AtlasENSG00000160111-CPAMD8 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8IZJ3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8IZJ3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8IZJ3
PhosPhoSitePlusQ8IZJ3
Domaine pattern : Prosite (Expaxy)ALPHA_2_MACROGLOBULIN (PS00477)    KAZAL_2 (PS51465)   
Domains : Interpro (EBI)A-macroglobulin_rcpt-bd    A-macroglobulin_rcpt-bd_sf    A2M_N_BRD    A2M_TED    Alpha-macroglobulin_TED    Ig-like_fold    Ig_E-set    Kazal_dom    Kazal_dom_sf    Macroglobln_a2    MacrogloblnA2_CS    Methyltransf_FA    MG2    MG3    MG4    Terpenoid_cyclase/PrenylTrfase   
Domain families : Pfam (Sanger)A2M (PF00207)    A2M_BRD (PF07703)    A2M_recep (PF07677)    Kazal_2 (PF07648)    Methyltransf_FA (PF12248)    MG2 (PF01835)    MG3 (PF17791)    MG4 (PF17789)    TED_complement (PF07678)   
Domain families : Pfam (NCBI)pfam00207    pfam07703    pfam07677    pfam07648    pfam12248    pfam01835    pfam17791    pfam17789    pfam07678   
Domain families : Smart (EMBL)A2M (SM01360)  A2M_N_2 (SM01359)  A2M_recep (SM01361)  KAZAL (SM00280)  
Conserved Domain (NCBI)CPAMD8
SuperfamilyQ8IZJ3
AlphaFold pdb e-kbQ8IZJ3   
Human Protein Atlas [tissue]ENSG00000160111-CPAMD8 [tissue]
HPRD09892
Protein Interaction databases
DIP (DOE-UCLA)Q8IZJ3
IntAct (EBI)Q8IZJ3
BioGRIDCPAMD8
STRING (EMBL)CPAMD8
ZODIACCPAMD8
Ontologies - Pathways
QuickGOQ8IZJ3
Ontology : AmiGOeye development  serine-type endopeptidase inhibitor activity  extracellular space  plasma membrane  negative regulation of endopeptidase activity  
Ontology : EGO-EBIeye development  serine-type endopeptidase inhibitor activity  extracellular space  plasma membrane  negative regulation of endopeptidase activity  
NDEx NetworkCPAMD8
Atlas of Cancer Signalling NetworkCPAMD8
Wikipedia pathwaysCPAMD8
Orthology - Evolution
OrthoDB27151
GeneTree (enSembl)ENSG00000160111
Phylogenetic Trees/Animal Genes : TreeFamCPAMD8
Homologs : HomoloGeneCPAMD8
Homology/Alignments : Family Browser (UCSC)CPAMD8
Gene fusions - Rearrangements
Fusion : QuiverCPAMD8
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCPAMD8 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CPAMD8
dbVarCPAMD8
ClinVarCPAMD8
MonarchCPAMD8
1000_GenomesCPAMD8 
Exome Variant ServerCPAMD8
GNOMAD BrowserENSG00000160111
Varsome BrowserCPAMD8
ACMGCPAMD8 variants
VarityQ8IZJ3
Genomic Variants (DGV)CPAMD8 [DGVbeta]
DECIPHERCPAMD8 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCPAMD8 
Mutations
ICGC Data PortalCPAMD8 
TCGA Data PortalCPAMD8 
Broad Tumor PortalCPAMD8
OASIS PortalCPAMD8 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCPAMD8  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DCPAMD8
Mutations and Diseases : HGMDCPAMD8
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaCPAMD8
DgiDB (Drug Gene Interaction Database)CPAMD8
DoCM (Curated mutations)CPAMD8
CIViC (Clinical Interpretations of Variants in Cancer)CPAMD8
Cancer3DCPAMD8
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM608841    617319   
Orphanet
DisGeNETCPAMD8
MedgenCPAMD8
Genetic Testing Registry CPAMD8
NextProtQ8IZJ3 [Medical]
GENETestsCPAMD8
Target ValidationCPAMD8
Huge Navigator CPAMD8 [HugePedia]
ClinGenCPAMD8
Clinical trials, drugs, therapy
MyCancerGenomeCPAMD8
Protein Interactions : CTDCPAMD8
Pharm GKB GenePA134915057
PharosQ8IZJ3
Clinical trialCPAMD8
Miscellaneous
canSAR (ICR)CPAMD8
HarmonizomeCPAMD8
ARCHS4CPAMD8
DataMed IndexCPAMD8
Probes
Litterature
PubMed17 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXCPAMD8
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Jan 20 13:15:27 CET 2022

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