Atlas of Genetics and Cytogenetics in Oncology and Haematology

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   
X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

CPD (carboxypeptidase D)

Identity

Other namesGP180
HGNC (Hugo) CPD
LocusID (NCBI) 1362
Location 17q11.2
Location_base_pair Starts at 28707496 and ends at 28796675 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)CPD   2301
Entrez_Gene (NCBI)CPD  1362  carboxypeptidase D
Cards
GeneCards (Weizmann)CPD
Ensembl (Hinxton)ENSG00000108582 [Gene_View]  chr17:28707496-28796675 [Contig_View]  CPD [Vega]
AceView (NCBI)CPD
Genatlas (Paris)CPD
SOURCE (Stanford)NM_001199775 NM_001304
Genomic and cartography
GoldenPath (UCSC)CPD  -  17q11.2   chr17:28707496-28796675 +  17q11.2   [Description]    (hg19-Feb_2009)
EnsemblCPD - 17q11.2 [CytoView]
Mapping of homologs : NCBICPD [Mapview]
OMIM603102   
Gene and transcription
Genbank (Entrez)AK302497 AK302878 AK316409 AL049339 BC020457
RefSeq transcript (SRS)NM_001199775 NM_001304
RefSeq transcript (Entrez)NM_001199775 NM_001304
RefSeq genomic (SRS)AC_000149 NC_000017 NC_018928 NT_010799 NW_001838430 NW_004078092
RefSeq genomic (Entrez)AC_000149 NC_000017 NC_018928 NT_010799 NW_001838430 NW_004078092
Consensus coding sequences : CCDS (NCBI)CPD
Cluster EST : UnigeneHs.446079 [ SRS ] Hs.446079 [ NCBI ]
CGAP (NCI)Hs.446079
Alternative Splicing : Fast-db (Paris)GSHG0012363
Alternative Splicing GalleryENSG00000108582
Gene ExpressionCPD [ NCBI-GEO ]   CPD [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtO75976 (SRS) O75976 (Uniprot)
NextProtO75976
With graphics : InterProO75976
Splice isoforms : SwissVarO75976(Swissvar)
Domaine pattern : Prosite (SRS)CARBOXYPEPT_ZN_1 (PS00132)    CARBOXYPEPT_ZN_2 (PS00133)   
Domaine pattern : Prosite (Expaxy)CARBOXYPEPT_ZN_1 (PS00132)    CARBOXYPEPT_ZN_2 (PS00133)   
Domains : Interpro (SRS)CarboxyPept-like_regulatory    CarboxyPept_regulatory_dom    Pept_M14B_carboxypept_D2    Peptidase_M14   
Domains : Interpro (EBI)CarboxyPept-like_regulatory    CarboxyPept_regulatory_dom    Pept_M14B_carboxypept_D2    Peptidase_M14   
Related proteins : CluSTrO75976
Domain families : Pfam (SRS)Peptidase_M14 (PF00246)   
Domain families : Pfam (Sanger)Peptidase_M14 (PF00246)   
Domain families : Pfam (NCBI)pfam00246   
Domain families : Smart (EMBL)Zn_pept (SM00631)  
DMDM1362
Blocks (Seattle)O75976
Human Protein AtlasENSG00000108582
HPRD04375
IPIIPI00027078   IPI00921861   IPI00979354   
Protein Interaction databases
DIP (DOE-UCLA)O75976
IntAct (EBI)O75976
FunCoupENSG00000108582
REACTOMECPD
Protein Interaction Database1362
BioGRIDCPD
InParanoidO75976
Interologous Interaction database O75976
IntegromeDBCPD
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)CPD
SNP (GeneSNP Utah)CPD
SNP : HGBaseCPD
Genetic variants : HAPMAPCPD
Somatic Mutations in Cancer : COSMICCPD 
CONAN: Copy Number AnalysisCPD 
Mutations and Diseases : HGMDCPD
OMIM603102   
GENETests603102   
Disease Genetic AssociationCPD
Huge Navigator CPD [HugePedia]  CPD [HugeCancerGEM]
Genomic VariantsCPD  CPD [DGVbeta]
snp3D : Map Gene to Disease1362
General knowledge
Homologs : HomoloGeneCPD
Homology/Alignments : Family Browser (UCSC)CPD
Phylogenetic Trees/Animal Genes : TreeFamCPD
Catalytic activity : Enzyme3.4.17.22 [ Enzyme-Expasy ]   3.4.17.22 [ Enzyme-SRS ]   3.4.17.22 [ IntEnz-EBI ]   3.4.17.22 [ BRENDA ]   3.4.17.22 [ KEGG ]   
Chemical/Protein Interactions : CTD1362
Chemical/Pharm GKB GenePA26823
Clinical trialCPD
Cancer Resource (Charite)ENSG00000108582
Ontology : AmiGOmetallocarboxypeptidase activity  serine-type carboxypeptidase activity  nucleus  trans-Golgi network  proteolysis  zinc ion binding  membrane  integral to membrane  metal ion binding  cellular response to interleukin-2  
Ontology : EGO-EBImetallocarboxypeptidase activity  serine-type carboxypeptidase activity  nucleus  trans-Golgi network  proteolysis  zinc ion binding  membrane  integral to membrane  metal ion binding  cellular response to interleukin-2  
Other databases
Probes
Litterature
PubMed24 Pubmed reference(s) in Entrez
PubGeneCPD
iHOPCPD
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 1 12:37:28 CEST 2013
Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.