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CPD (carboxypeptidase D)

Identity

Other namesGP180
HGNC (Hugo) CPD
LocusID (NCBI) 1362
Location 17q11.2
Location_base_pair Starts at 28707496 and ends at 28796675 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)CPD   2301
Cards
Entrez_Gene (NCBI)CPD  1362  carboxypeptidase D
GeneCards (Weizmann)CPD
Ensembl (Hinxton)ENSG00000108582 [Gene_View]  chr17:28707496-28796675 [Contig_View]  CPD [Vega]
ICGC DataPortalENSG00000108582
cBioPortalCPD
AceView (NCBI)CPD
Genatlas (Paris)CPD
WikiGenes1362
SOURCE (Princeton)NM_001199775 NM_001304
Genomic and cartography
GoldenPath (UCSC)CPD  -  17q11.2   chr17:28707496-28796675 +  17q11.2   [Description]    (hg19-Feb_2009)
EnsemblCPD - 17q11.2 [CytoView]
Mapping of homologs : NCBICPD [Mapview]
OMIM603102   
Gene and transcription
Genbank (Entrez)AK302497 AK302878 AK316409 AL049339 BC020457
RefSeq transcript (Entrez)NM_001199775 NM_001304
RefSeq genomic (Entrez)AC_000149 NC_000017 NC_018928 NT_010783 NW_001838430 NW_004929407
Consensus coding sequences : CCDS (NCBI)CPD
Cluster EST : UnigeneHs.446079 [ NCBI ]
CGAP (NCI)Hs.446079
Alternative Splicing : Fast-db (Paris)GSHG0012363
Alternative Splicing GalleryENSG00000108582
Gene ExpressionCPD [ NCBI-GEO ]     CPD [ SEEK ]   CPD [ MEM ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtO75976 (Uniprot)
NextProtO75976  [Medical]
With graphics : InterProO75976
Splice isoforms : SwissVarO75976 (Swissvar)
Catalytic activity : Enzyme3.4.17.22 [ Enzyme-Expasy ]   3.4.17.223.4.17.22 [ IntEnz-EBI ]   3.4.17.22 [ BRENDA ]   3.4.17.22 [ KEGG ]   
Domaine pattern : Prosite (Expaxy)CARBOXYPEPT_ZN_1 (PS00132)    CARBOXYPEPT_ZN_2 (PS00133)   
Domains : Interpro (EBI)CarboxyPept-like_regulatory [organisation]   CarboxyPept_regulatory_dom [organisation]   Pept_M14B_carboxypept_D2 [organisation]   Peptidase_M14 [organisation]  
Related proteins : CluSTrO75976
Domain families : Pfam (Sanger)Peptidase_M14 (PF00246)   
Domain families : Pfam (NCBI)pfam00246   
Domain families : Smart (EMBL)Zn_pept (SM00631)  
DMDM Disease mutations1362
Blocks (Seattle)O75976
Human Protein AtlasENSG00000108582 [gene] [tissue] [antibody] [cell] [cancer]
Peptide AtlasO75976
HPRD04375
IPIIPI00027078   IPI00921861   IPI00979354   
Protein Interaction databases
DIP (DOE-UCLA)O75976
IntAct (EBI)O75976
FunCoupENSG00000108582
BioGRIDCPD
InParanoidO75976
Interologous Interaction database O75976
IntegromeDBCPD
STRING (EMBL)CPD
Ontologies - Pathways
Ontology : AmiGOmetallocarboxypeptidase activity  serine-type carboxypeptidase activity  proteolysis  zinc ion binding  membrane  integral component of membrane  extracellular vesicular exosome  
Ontology : EGO-EBImetallocarboxypeptidase activity  serine-type carboxypeptidase activity  proteolysis  zinc ion binding  membrane  integral component of membrane  extracellular vesicular exosome  
Protein Interaction DatabaseCPD
Wikipedia pathwaysCPD
Gene fusion - rearrangments
Polymorphisms : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)CPD
snp3D : Map Gene to Disease1362
SNP (GeneSNP Utah)CPD
SNP : HGBaseCPD
Genetic variants : HAPMAPCPD
Exome VariantCPD
1000_GenomesCPD 
ICGC programENSG00000108582 
Somatic Mutations in Cancer : COSMICCPD 
CONAN: Copy Number AnalysisCPD 
Mutations and Diseases : HGMDCPD
Genomic VariantsCPD  CPD [DGVbeta]
dbVarCPD
ClinVarCPD
Pred. of missensesPolyPhen-2  SIFT(SG)  SIFT(JCVI)  Align-GVGD  MutAssessor  Mutanalyser  
Pred. splicesGeneSplicer  Human Splicing Finder  MaxEntScan  
Diseases
OMIM603102   
MedgenCPD
GENETestsCPD
Disease Genetic AssociationCPD
Huge Navigator CPD [HugePedia]  CPD [HugeCancerGEM]
General knowledge
Homologs : HomoloGeneCPD
Homology/Alignments : Family Browser (UCSC)CPD
Phylogenetic Trees/Animal Genes : TreeFamCPD
Chemical/Protein Interactions : CTD1362
Chemical/Pharm GKB GenePA26823
Clinical trialCPD
Cancer Resource (Charite)ENSG00000108582
Other databases
Probes
Litterature
PubMed35 Pubmed reference(s) in Entrez
CoreMineCPD
iHOPCPD
OncoSearchCPD
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated12-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jul 30 13:49:24 CEST 2014

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