Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

CPEB1-AS1 (CPEB1 antisense RNA 1)

Identity

Other alias-
HGNC (Hugo) CPEB1-AS1
LocusID (NCBI) 283692
Atlas_Id 77538
Location 15q25.2  [Link to chromosome band 15q25]
Location_base_pair Starts at 82647770 and ends at 82692820 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CPEB1-AS1   27523
Cards
Entrez_Gene (NCBI)CPEB1-AS1  283692  CPEB1 antisense RNA 1
Aliases
GeneCards (Weizmann)CPEB1-AS1
Ensembl hg19 (Hinxton)ENSG00000259462 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000259462 [Gene_View]  chr15:82647770-82692820 [Contig_View]  CPEB1-AS1 [Vega]
ICGC DataPortalENSG00000259462
TCGA cBioPortalCPEB1-AS1
AceView (NCBI)CPEB1-AS1
Genatlas (Paris)CPEB1-AS1
WikiGenes283692
SOURCE (Princeton)CPEB1-AS1
Genetics Home Reference (NIH)CPEB1-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)CPEB1-AS1  -     chr15:82647770-82692820 +  15q25.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CPEB1-AS1  -     15q25.2   [Description]    (hg19-Feb_2009)
EnsemblCPEB1-AS1 - 15q25.2 [CytoView hg19]  CPEB1-AS1 - 15q25.2 [CytoView hg38]
Mapping of homologs : NCBICPEB1-AS1 [Mapview hg19]  CPEB1-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC035360 DB070426
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CPEB1-AS1
Cluster EST : UnigeneHs.739820 [ NCBI ]
CGAP (NCI)Hs.739820
Alternative Splicing GalleryENSG00000259462
Gene ExpressionCPEB1-AS1 [ NCBI-GEO ]   CPEB1-AS1 [ EBI - ARRAY_EXPRESS ]   CPEB1-AS1 [ SEEK ]   CPEB1-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)CPEB1-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)283692
GTEX Portal (Tissue expression)CPEB1-AS1
Human Protein AtlasENSG00000259462-CPEB1-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CPEB1-AS1
DMDM Disease mutations283692
Blocks (Seattle)CPEB1-AS1
Human Protein Atlas [tissue]ENSG00000259462-CPEB1-AS1 [tissue]
Protein Interaction databases
FunCoupENSG00000259462
BioGRIDCPEB1-AS1
STRING (EMBL)CPEB1-AS1
ZODIACCPEB1-AS1
Ontologies - Pathways
Huge Navigator CPEB1-AS1 [HugePedia]
snp3D : Map Gene to Disease283692
BioCentury BCIQCPEB1-AS1
ClinGenCPEB1-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD283692
Clinical trialCPEB1-AS1
Miscellaneous
canSAR (ICR)CPEB1-AS1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCPEB1-AS1
EVEXCPEB1-AS1
GoPubMedCPEB1-AS1
iHOPCPEB1-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 11:43:17 CET 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.