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CPLX3 (complexin 3)

Identity

Alias_symbol (synonym)CPX-III
Other aliasCPXIII
Nbla11589
HGNC (Hugo) CPLX3
LocusID (NCBI) 594855
Atlas_Id 56102
Location 15q24.1  [Link to chromosome band 15q24]
Location_base_pair Starts at 74826610 and ends at 74831795 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CPLX3   27652
Cards
Entrez_Gene (NCBI)CPLX3  594855  complexin 3
AliasesCPX-III; CPXIII; Nbla11589
GeneCards (Weizmann)CPLX3
Ensembl hg19 (Hinxton)ENSG00000213578 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000213578 [Gene_View]  chr15:74826610-74831795 [Contig_View]  CPLX3 [Vega]
ICGC DataPortalENSG00000213578
TCGA cBioPortalCPLX3
AceView (NCBI)CPLX3
Genatlas (Paris)CPLX3
WikiGenes594855
SOURCE (Princeton)CPLX3
Genetics Home Reference (NIH)CPLX3
Genomic and cartography
GoldenPath hg38 (UCSC)CPLX3  -     chr15:74826610-74831795 +  15q24.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CPLX3  -     15q24.1   [Description]    (hg19-Feb_2009)
EnsemblCPLX3 - 15q24.1 [CytoView hg19]  CPLX3 - 15q24.1 [CytoView hg38]
Mapping of homologs : NCBICPLX3 [Mapview hg19]  CPLX3 [Mapview hg38]
OMIM609585   
Gene and transcription
Genbank (Entrez)AB072900 AK024055 AU253913 AY286501 BC018026
RefSeq transcript (Entrez)NM_001030005
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CPLX3
Cluster EST : UnigeneHs.187694 [ NCBI ]
CGAP (NCI)Hs.187694
Alternative Splicing GalleryENSG00000213578
Gene ExpressionCPLX3 [ NCBI-GEO ]   CPLX3 [ EBI - ARRAY_EXPRESS ]   CPLX3 [ SEEK ]   CPLX3 [ MEM ]
Gene Expression Viewer (FireBrowse)CPLX3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)594855
GTEX Portal (Tissue expression)CPLX3
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8WVH0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8WVH0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8WVH0
Splice isoforms : SwissVarQ8WVH0
PhosPhoSitePlusQ8WVH0
Domains : Interpro (EBI)Synaphin   
Domain families : Pfam (Sanger)Synaphin (PF05835)   
Domain families : Pfam (NCBI)pfam05835   
Conserved Domain (NCBI)CPLX3
DMDM Disease mutations594855
Blocks (Seattle)CPLX3
SuperfamilyQ8WVH0
Human Protein AtlasENSG00000213578
Peptide AtlasQ8WVH0
IPIIPI00552733   
Protein Interaction databases
DIP (DOE-UCLA)Q8WVH0
IntAct (EBI)Q8WVH0
FunCoupENSG00000213578
BioGRIDCPLX3
STRING (EMBL)CPLX3
ZODIACCPLX3
Ontologies - Pathways
QuickGOQ8WVH0
Ontology : AmiGOneurotransmitter transporter activity  cytosol  plasma membrane  synaptic vesicle exocytosis  syntaxin binding  cell junction  insulin secretion  regulation of neurotransmitter secretion  presynapse  
Ontology : EGO-EBIneurotransmitter transporter activity  cytosol  plasma membrane  synaptic vesicle exocytosis  syntaxin binding  cell junction  insulin secretion  regulation of neurotransmitter secretion  presynapse  
Pathways : KEGGSynaptic vesicle cycle   
NDEx NetworkCPLX3
Atlas of Cancer Signalling NetworkCPLX3
Wikipedia pathwaysCPLX3
Orthology - Evolution
OrthoDB594855
GeneTree (enSembl)ENSG00000213578
Phylogenetic Trees/Animal Genes : TreeFamCPLX3
HOVERGENQ8WVH0
HOGENOMQ8WVH0
Homologs : HomoloGeneCPLX3
Homology/Alignments : Family Browser (UCSC)CPLX3
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCPLX3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CPLX3
dbVarCPLX3
ClinVarCPLX3
1000_GenomesCPLX3 
Exome Variant ServerCPLX3
ExAC (Exome Aggregation Consortium)CPLX3 (select the gene name)
Genetic variants : HAPMAP594855
Genomic Variants (DGV)CPLX3 [DGVbeta]
DECIPHERCPLX3 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCPLX3 
Mutations
ICGC Data PortalCPLX3 
TCGA Data PortalCPLX3 
Broad Tumor PortalCPLX3
OASIS PortalCPLX3 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCPLX3  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDCPLX3
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch CPLX3
DgiDB (Drug Gene Interaction Database)CPLX3
DoCM (Curated mutations)CPLX3 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CPLX3 (select a term)
intoGenCPLX3
Cancer3DCPLX3(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM609585   
Orphanet
MedgenCPLX3
Genetic Testing Registry CPLX3
NextProtQ8WVH0 [Medical]
TSGene594855
GENETestsCPLX3
Target ValidationCPLX3
Huge Navigator CPLX3 [HugePedia]
snp3D : Map Gene to Disease594855
BioCentury BCIQCPLX3
ClinGenCPLX3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD594855
Chemical/Pharm GKB GenePA142672081
Clinical trialCPLX3
Miscellaneous
canSAR (ICR)CPLX3 (select the gene name)
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCPLX3
EVEXCPLX3
GoPubMedCPLX3
iHOPCPLX3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 12:29:24 CEST 2017

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