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CPOX (coproporphyrinogen oxidase)

Identity

Other namesCPO
CPX
HCP
HGNC (Hugo) CPOX
LocusID (NCBI) 1371
Location 3q11.2
Location_base_pair Starts at 98298290 and ends at 98312455 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

External links

Nomenclature
HGNC (Hugo)CPOX   2321
Entrez_Gene (NCBI)CPOX  1371  coproporphyrinogen oxidase
Cards
GeneCards (Weizmann)CPOX
Ensembl (Hinxton)ENSG00000080819 [Gene_View]  chr3:98298290-98312455 [Contig_View]  CPOX [Vega]
AceView (NCBI)CPOX
Genatlas (Paris)CPOX
SOURCE (Stanford)NM_000097
Genomic and cartography
GoldenPath (UCSC)CPOX  -  3q11.2   chr3:98298290-98312455 -  3q11.2   [Description]    (hg19-Feb_2009)
EnsemblCPOX - 3q11.2 [CytoView]
Mapping of homologs : NCBICPOX [Mapview]
OMIM121300   612732   
Gene and transcription
Genbank (Entrez)AK223481 AK290140 AK299692 BC017210 BC023551
RefSeq transcript (SRS)NM_000097
RefSeq transcript (Entrez)NM_000097
RefSeq genomic (SRS)AC_000135 NC_000003 NC_018914 NG_015994 NT_005612 NW_001838880 NW_004078013
RefSeq genomic (Entrez)AC_000135 NC_000003 NC_018914 NG_015994 NT_005612 NW_001838880 NW_004078013
Consensus coding sequences : CCDS (NCBI)CPOX
Cluster EST : UnigeneHs.476982 [ SRS ] Hs.476982 [ NCBI ]
CGAP (NCI)Hs.476982
Alternative Splicing : Fast-db (Paris)GSHG0021893
Alternative Splicing GalleryENSG00000080819
Gene ExpressionCPOX [ NCBI-GEO ]   CPOX [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP36551 (SRS) P36551 (Uniprot)
NextProtP36551
With graphics : InterProP36551
Splice isoforms : SwissVarP36551(Swissvar)
Domaine pattern : Prosite (SRS)COPROGEN_OXIDASE (PS01021)   
Domaine pattern : Prosite (Expaxy)COPROGEN_OXIDASE (PS01021)   
Domains : Interpro (SRS)Coprogen_oxidase_aer    Coprogen_oxidase_CS   
Domains : Interpro (EBI)Coprogen_oxidase_aer    Coprogen_oxidase_CS   
Related proteins : CluSTrP36551
Domain families : Pfam (SRS)Coprogen_oxidas (PF01218)   
Domain families : Pfam (Sanger)Coprogen_oxidas (PF01218)   
Domain families : Pfam (NCBI)pfam01218   
DMDM1371
Blocks (Seattle)P36551
PDB (SRS)2AEX   
PDB (PDBSum)2AEX   
PDB (IMB)2AEX   
PDB (RSDB)2AEX   
Human Protein AtlasENSG00000080819
HPRD00417
IPIIPI00093057   IPI00963892   IPI00964195   
Protein Interaction databases
DIP (DOE-UCLA)P36551
IntAct (EBI)P36551
FunCoupENSG00000080819
REACTOMECPOX
Protein Interaction Database1371
BioGRIDCPOX
InParanoidP36551
Interologous Interaction database P36551
IntegromeDBCPOX
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)CPOX
SNP (GeneSNP Utah)CPOX
SNP : HGBaseCPOX
Genetic variants : HAPMAPCPOX
Somatic Mutations in Cancer : COSMICCPOX 
CONAN: Copy Number AnalysisCPOX 
Mutations and Diseases : HGMDCPOX
OMIM121300    612732   
GENETests121300    612732   
Disease Genetic AssociationCPOX
Huge Navigator CPOX [HugePedia]  CPOX [HugeCancerGEM]
Genomic VariantsCPOX  CPOX [DGVbeta]
snp3D : Map Gene to Disease1371
General knowledge
Homologs : HomoloGeneCPOX
Homology/Alignments : Family Browser (UCSC)CPOX
Phylogenetic Trees/Animal Genes : TreeFamCPOX
Catalytic activity : Enzyme1.3.3.3 [ Enzyme-Expasy ]   1.3.3.3 [ Enzyme-SRS ]   1.3.3.3 [ IntEnz-EBI ]   1.3.3.3 [ BRENDA ]   1.3.3.3 [ KEGG ]   
Chemical/Protein Interactions : CTD1371
Chemical/Pharm GKB GenePA134979958
Clinical trialCPOX
Cancer Resource (Charite)ENSG00000080819
Ontology : AmiGOcoproporphyrinogen oxidase activity  cytoplasm  mitochondrion  mitochondrial inner membrane  mitochondrial intermembrane space  porphyrin-containing compound metabolic process  protoporphyrinogen IX biosynthetic process  heme biosynthetic process  response to iron ion  response to lead ion  response to insecticide  protein homodimerization activity  small molecule metabolic process  response to arsenic-containing substance  response to methylmercury  
Ontology : EGO-EBIcoproporphyrinogen oxidase activity  cytoplasm  mitochondrion  mitochondrial inner membrane  mitochondrial intermembrane space  porphyrin-containing compound metabolic process  protoporphyrinogen IX biosynthetic process  heme biosynthetic process  response to iron ion  response to lead ion  response to insecticide  protein homodimerization activity  small molecule metabolic process  response to arsenic-containing substance  response to methylmercury  
Pathways : BIOCARTAHemoglobin's Chaperone [Genes]   
Pathways : KEGGPorphyrin and chlorophyll metabolism
Other databases
Probes
Litterature
PubMed45 Pubmed reference(s) in Entrez
PubGeneCPOX
iHOPCPOX
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 1 12:34:09 CEST 2013
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