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CPVL (carboxypeptidase, vitellogenic like)

Identity

Alias_namescarboxypeptidase, vitellogenic-like
Other aliasHVLP
HGNC (Hugo) CPVL
LocusID (NCBI) 54504
Atlas_Id 62069
Location 7p14.3  [Link to chromosome band 7p14]
Location_base_pair Starts at 28995231 and ends at 29195451 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
CPVL (7p14.3) / JAZF1 (7p15.2)GDI2 (10p15.1) / CPVL (7p14.3)GFAP (17q21.31) / CPVL (7p14.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CPVL   14399
Cards
Entrez_Gene (NCBI)CPVL  54504  carboxypeptidase, vitellogenic like
AliasesHVLP
GeneCards (Weizmann)CPVL
Ensembl hg19 (Hinxton)ENSG00000106066 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000106066 [Gene_View]  chr7:28995231-29195451 [Contig_View]  CPVL [Vega]
ICGC DataPortalENSG00000106066
TCGA cBioPortalCPVL
AceView (NCBI)CPVL
Genatlas (Paris)CPVL
WikiGenes54504
SOURCE (Princeton)CPVL
Genetics Home Reference (NIH)CPVL
Genomic and cartography
GoldenPath hg38 (UCSC)CPVL  -     chr7:28995231-29195451 -  7p14.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CPVL  -     7p14.3   [Description]    (hg19-Feb_2009)
EnsemblCPVL - 7p14.3 [CytoView hg19]  CPVL - 7p14.3 [CytoView hg38]
Mapping of homologs : NCBICPVL [Mapview hg19]  CPVL [Mapview hg38]
OMIM609780   
Gene and transcription
Genbank (Entrez)AF106704 AF217508 AF282617 AK075433 AK124472
RefSeq transcript (Entrez)NM_001348052 NM_001348054 NM_019029 NM_031311
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CPVL
Cluster EST : UnigeneHs.233389 [ NCBI ]
CGAP (NCI)Hs.233389
Alternative Splicing GalleryENSG00000106066
Gene ExpressionCPVL [ NCBI-GEO ]   CPVL [ EBI - ARRAY_EXPRESS ]   CPVL [ SEEK ]   CPVL [ MEM ]
Gene Expression Viewer (FireBrowse)CPVL [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)54504
GTEX Portal (Tissue expression)CPVL
Human Protein AtlasENSG00000106066-CPVL [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9H3G5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9H3G5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9H3G5
Splice isoforms : SwissVarQ9H3G5
Catalytic activity : Enzyme3.4.16.- [ Enzyme-Expasy ]   3.4.16.-3.4.16.- [ IntEnz-EBI ]   3.4.16.- [ BRENDA ]   3.4.16.- [ KEGG ]   
PhosPhoSitePlusQ9H3G5
Domaine pattern : Prosite (Expaxy)CARBOXYPEPT_SER_SER (PS00131)   
Domains : Interpro (EBI)AB_hydrolase    Peptidase_S10    Ser_caboxypep_ser_AS   
Domain families : Pfam (Sanger)Peptidase_S10 (PF00450)   
Domain families : Pfam (NCBI)pfam00450   
Conserved Domain (NCBI)CPVL
DMDM Disease mutations54504
Blocks (Seattle)CPVL
SuperfamilyQ9H3G5
Human Protein Atlas [tissue]ENSG00000106066-CPVL [tissue]
Peptide AtlasQ9H3G5
HPRD07479
IPIIPI00301395   IPI00916887   IPI00915961   IPI00917290   IPI00916536   IPI00917904   IPI00917529   IPI00917030   IPI00917799   
Protein Interaction databases
DIP (DOE-UCLA)Q9H3G5
IntAct (EBI)Q9H3G5
FunCoupENSG00000106066
BioGRIDCPVL
STRING (EMBL)CPVL
ZODIACCPVL
Ontologies - Pathways
QuickGOQ9H3G5
Ontology : AmiGOserine-type carboxypeptidase activity  proteolysis involved in cellular protein catabolic process  extracellular exosome  
Ontology : EGO-EBIserine-type carboxypeptidase activity  proteolysis involved in cellular protein catabolic process  extracellular exosome  
NDEx NetworkCPVL
Atlas of Cancer Signalling NetworkCPVL
Wikipedia pathwaysCPVL
Orthology - Evolution
OrthoDB54504
GeneTree (enSembl)ENSG00000106066
Phylogenetic Trees/Animal Genes : TreeFamCPVL
HOVERGENQ9H3G5
HOGENOMQ9H3G5
Homologs : HomoloGeneCPVL
Homology/Alignments : Family Browser (UCSC)CPVL
Gene fusions - Rearrangements
Tumor Fusion PortalCPVL
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCPVL [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CPVL
dbVarCPVL
ClinVarCPVL
1000_GenomesCPVL 
Exome Variant ServerCPVL
ExAC (Exome Aggregation Consortium)ENSG00000106066
GNOMAD BrowserENSG00000106066
Genetic variants : HAPMAP54504
Genomic Variants (DGV)CPVL [DGVbeta]
DECIPHERCPVL [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCPVL 
Mutations
ICGC Data PortalCPVL 
TCGA Data PortalCPVL 
Broad Tumor PortalCPVL
OASIS PortalCPVL [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCPVL  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDCPVL
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch CPVL
DgiDB (Drug Gene Interaction Database)CPVL
DoCM (Curated mutations)CPVL (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CPVL (select a term)
intoGenCPVL
Cancer3DCPVL(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM609780   
Orphanet
DisGeNETCPVL
MedgenCPVL
Genetic Testing Registry CPVL
NextProtQ9H3G5 [Medical]
TSGene54504
GENETestsCPVL
Target ValidationCPVL
Huge Navigator CPVL [HugePedia]
snp3D : Map Gene to Disease54504
BioCentury BCIQCPVL
ClinGenCPVL
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD54504
Chemical/Pharm GKB GenePA26850
Clinical trialCPVL
Miscellaneous
canSAR (ICR)CPVL (select the gene name)
Probes
Litterature
PubMed41 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCPVL
EVEXCPVL
GoPubMedCPVL
iHOPCPVL
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:15:54 CET 2017

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