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CPXM1 (carboxypeptidase X, M14 family member 1)

Identity

Alias_namesCPXM
carboxypeptidase X (M14 family), member 1
Alias_symbol (synonym)CPX-1
CPX1
Other alias
HGNC (Hugo) CPXM1
LocusID (NCBI) 56265
Atlas_Id 62071
Location 20p13  [Link to chromosome band 20p13]
Location_base_pair Starts at 2794069 and ends at 2800646 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
GYS1 (19q13.33) / CPXM1 (20p13)LASP1 (17q12) / CPXM1 (20p13)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CPXM1   15771
Cards
Entrez_Gene (NCBI)CPXM1  56265  carboxypeptidase X, M14 family member 1
AliasesCPX1; CPXM
GeneCards (Weizmann)CPXM1
Ensembl hg19 (Hinxton)ENSG00000088882 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000088882 [Gene_View]  chr20:2794069-2800646 [Contig_View]  CPXM1 [Vega]
ICGC DataPortalENSG00000088882
TCGA cBioPortalCPXM1
AceView (NCBI)CPXM1
Genatlas (Paris)CPXM1
WikiGenes56265
SOURCE (Princeton)CPXM1
Genetics Home Reference (NIH)CPXM1
Genomic and cartography
GoldenPath hg38 (UCSC)CPXM1  -     chr20:2794069-2800646 -  20p13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CPXM1  -     20p13   [Description]    (hg19-Feb_2009)
EnsemblCPXM1 - 20p13 [CytoView hg19]  CPXM1 - 20p13 [CytoView hg38]
Mapping of homologs : NCBICPXM1 [Mapview hg19]  CPXM1 [Mapview hg38]
OMIM609555   
Gene and transcription
Genbank (Entrez)AI470029 AK027661 AK075508 AK075527 AK303142
RefSeq transcript (Entrez)NM_001184699 NM_019609
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CPXM1
Cluster EST : UnigeneHs.659346 [ NCBI ]
CGAP (NCI)Hs.659346
Alternative Splicing GalleryENSG00000088882
Gene ExpressionCPXM1 [ NCBI-GEO ]   CPXM1 [ EBI - ARRAY_EXPRESS ]   CPXM1 [ SEEK ]   CPXM1 [ MEM ]
Gene Expression Viewer (FireBrowse)CPXM1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)56265
GTEX Portal (Tissue expression)CPXM1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96SM3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96SM3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96SM3
Splice isoforms : SwissVarQ96SM3
Catalytic activity : Enzyme3.4.17.- [ Enzyme-Expasy ]   3.4.17.-3.4.17.- [ IntEnz-EBI ]   3.4.17.- [ BRENDA ]   3.4.17.- [ KEGG ]   
PhosPhoSitePlusQ96SM3
Domaine pattern : Prosite (Expaxy)CARBOXYPEPT_ZN_1 (PS00132)    CARBOXYPEPT_ZN_2 (PS00133)    FA58C_3 (PS50022)   
Domains : Interpro (EBI)AEBP1/CPX_M14_CPD    CarboxyPept-like_regulatory    CarboxyPept_regulatory_dom    FA58C    Galactose-bd-like    Peptidase_M14   
Domain families : Pfam (Sanger)F5_F8_type_C (PF00754)    Peptidase_M14 (PF00246)   
Domain families : Pfam (NCBI)pfam00754    pfam00246   
Domain families : Smart (EMBL)FA58C (SM00231)  Zn_pept (SM00631)  
Conserved Domain (NCBI)CPXM1
DMDM Disease mutations56265
Blocks (Seattle)CPXM1
SuperfamilyQ96SM3
Human Protein AtlasENSG00000088882
Peptide AtlasQ96SM3
HPRD07099
IPIIPI00304721   IPI01013787   IPI00983988   
Protein Interaction databases
DIP (DOE-UCLA)Q96SM3
IntAct (EBI)Q96SM3
FunCoupENSG00000088882
BioGRIDCPXM1
STRING (EMBL)CPXM1
ZODIACCPXM1
Ontologies - Pathways
QuickGOQ96SM3
Ontology : AmiGOmetallocarboxypeptidase activity  extracellular space  peptide metabolic process  zinc ion binding  protein processing  
Ontology : EGO-EBImetallocarboxypeptidase activity  extracellular space  peptide metabolic process  zinc ion binding  protein processing  
NDEx NetworkCPXM1
Atlas of Cancer Signalling NetworkCPXM1
Wikipedia pathwaysCPXM1
Orthology - Evolution
OrthoDB56265
GeneTree (enSembl)ENSG00000088882
Phylogenetic Trees/Animal Genes : TreeFamCPXM1
HOVERGENQ96SM3
HOGENOMQ96SM3
Homologs : HomoloGeneCPXM1
Homology/Alignments : Family Browser (UCSC)CPXM1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCPXM1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CPXM1
dbVarCPXM1
ClinVarCPXM1
1000_GenomesCPXM1 
Exome Variant ServerCPXM1
ExAC (Exome Aggregation Consortium)CPXM1 (select the gene name)
Genetic variants : HAPMAP56265
Genomic Variants (DGV)CPXM1 [DGVbeta]
DECIPHERCPXM1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCPXM1 
Mutations
ICGC Data PortalCPXM1 
TCGA Data PortalCPXM1 
Broad Tumor PortalCPXM1
OASIS PortalCPXM1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCPXM1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDCPXM1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch CPXM1
DgiDB (Drug Gene Interaction Database)CPXM1
DoCM (Curated mutations)CPXM1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CPXM1 (select a term)
intoGenCPXM1
Cancer3DCPXM1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM609555   
Orphanet
MedgenCPXM1
Genetic Testing Registry CPXM1
NextProtQ96SM3 [Medical]
TSGene56265
GENETestsCPXM1
Huge Navigator CPXM1 [HugePedia]
snp3D : Map Gene to Disease56265
BioCentury BCIQCPXM1
ClinGenCPXM1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD56265
Chemical/Pharm GKB GenePA162382779
Clinical trialCPXM1
Miscellaneous
canSAR (ICR)CPXM1 (select the gene name)
Probes
Litterature
PubMed11 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCPXM1
EVEXCPXM1
GoPubMedCPXM1
iHOPCPXM1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri May 19 11:06:51 CEST 2017

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