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CPXM2 (carboxypeptidase X, M14 family member 2)

Identity

Alias_namescarboxypeptidase X (M14 family), member 2
Alias_symbol (synonym)UNQ676
CPX2
Other alias
HGNC (Hugo) CPXM2
LocusID (NCBI) 119587
Atlas_Id 62072
Location 10q26.13  [Link to chromosome band 10q26]
Location_base_pair Starts at 123745636 and ends at 123891984 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
TKT (3p21.1) / CPXM2 (10q26.13)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CPXM2   26977
Cards
Entrez_Gene (NCBI)CPXM2  119587  carboxypeptidase X, M14 family member 2
AliasesCPX2; UNQ676
GeneCards (Weizmann)CPXM2
Ensembl hg19 (Hinxton)ENSG00000121898 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000121898 [Gene_View]  chr10:123745636-123891984 [Contig_View]  CPXM2 [Vega]
ICGC DataPortalENSG00000121898
TCGA cBioPortalCPXM2
AceView (NCBI)CPXM2
Genatlas (Paris)CPXM2
WikiGenes119587
SOURCE (Princeton)CPXM2
Genetics Home Reference (NIH)CPXM2
Genomic and cartography
GoldenPath hg38 (UCSC)CPXM2  -     chr10:123745636-123891984 -  10q26.13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CPXM2  -     10q26.13   [Description]    (hg19-Feb_2009)
EnsemblCPXM2 - 10q26.13 [CytoView hg19]  CPXM2 - 10q26.13 [CytoView hg38]
Mapping of homologs : NCBICPXM2 [Mapview hg19]  CPXM2 [Mapview hg38]
OMIM617348   
Gene and transcription
Genbank (Entrez)AK123463 AK296365 AK300506 AK304023 AK304814
RefSeq transcript (Entrez)NM_198148
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CPXM2
Cluster EST : UnigeneHs.663647 [ NCBI ]
CGAP (NCI)Hs.663647
Alternative Splicing GalleryENSG00000121898
Gene ExpressionCPXM2 [ NCBI-GEO ]   CPXM2 [ EBI - ARRAY_EXPRESS ]   CPXM2 [ SEEK ]   CPXM2 [ MEM ]
Gene Expression Viewer (FireBrowse)CPXM2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)119587
GTEX Portal (Tissue expression)CPXM2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N436   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N436  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N436
Splice isoforms : SwissVarQ8N436
PhosPhoSitePlusQ8N436
Domaine pattern : Prosite (Expaxy)CARBOXYPEPT_ZN_1 (PS00132)    FA58C_1 (PS01285)    FA58C_2 (PS01286)    FA58C_3 (PS50022)   
Domains : Interpro (EBI)AEBP1/CPX_M14_CPD    CarboxyPept-like_regulatory    CarboxyPept_regulatory_dom    FA58C    Galactose-bd-like    Peptidase_M14   
Domain families : Pfam (Sanger)F5_F8_type_C (PF00754)    Peptidase_M14 (PF00246)   
Domain families : Pfam (NCBI)pfam00754    pfam00246   
Domain families : Smart (EMBL)FA58C (SM00231)  Zn_pept (SM00631)  
Conserved Domain (NCBI)CPXM2
DMDM Disease mutations119587
Blocks (Seattle)CPXM2
SuperfamilyQ8N436
Human Protein AtlasENSG00000121898
Peptide AtlasQ8N436
HPRD08517
IPIIPI00296558   IPI01011446   IPI00910836   IPI00643389   
Protein Interaction databases
DIP (DOE-UCLA)Q8N436
IntAct (EBI)Q8N436
FunCoupENSG00000121898
BioGRIDCPXM2
STRING (EMBL)CPXM2
ZODIACCPXM2
Ontologies - Pathways
QuickGOQ8N436
Ontology : AmiGOmetallocarboxypeptidase activity  extracellular space  peptide metabolic process  zinc ion binding  protein processing  extracellular matrix  
Ontology : EGO-EBImetallocarboxypeptidase activity  extracellular space  peptide metabolic process  zinc ion binding  protein processing  extracellular matrix  
NDEx NetworkCPXM2
Atlas of Cancer Signalling NetworkCPXM2
Wikipedia pathwaysCPXM2
Orthology - Evolution
OrthoDB119587
GeneTree (enSembl)ENSG00000121898
Phylogenetic Trees/Animal Genes : TreeFamCPXM2
HOVERGENQ8N436
HOGENOMQ8N436
Homologs : HomoloGeneCPXM2
Homology/Alignments : Family Browser (UCSC)CPXM2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCPXM2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CPXM2
dbVarCPXM2
ClinVarCPXM2
1000_GenomesCPXM2 
Exome Variant ServerCPXM2
ExAC (Exome Aggregation Consortium)CPXM2 (select the gene name)
Genetic variants : HAPMAP119587
Genomic Variants (DGV)CPXM2 [DGVbeta]
DECIPHERCPXM2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCPXM2 
Mutations
ICGC Data PortalCPXM2 
TCGA Data PortalCPXM2 
Broad Tumor PortalCPXM2
OASIS PortalCPXM2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCPXM2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDCPXM2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch CPXM2
DgiDB (Drug Gene Interaction Database)CPXM2
DoCM (Curated mutations)CPXM2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CPXM2 (select a term)
intoGenCPXM2
Cancer3DCPXM2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM617348   
Orphanet
MedgenCPXM2
Genetic Testing Registry CPXM2
NextProtQ8N436 [Medical]
TSGene119587
GENETestsCPXM2
Target ValidationCPXM2
Huge Navigator CPXM2 [HugePedia]
snp3D : Map Gene to Disease119587
BioCentury BCIQCPXM2
ClinGenCPXM2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD119587
Chemical/Pharm GKB GenePA134866722
Clinical trialCPXM2
Miscellaneous
canSAR (ICR)CPXM2 (select the gene name)
Probes
Litterature
PubMed11 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCPXM2
EVEXCPXM2
GoPubMedCPXM2
iHOPCPXM2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:44:29 CEST 2017

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