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CRACD (capping protein inhibiting regulator of actin dynamics)

Identity

Alias (NCBI)CRAD
KIAA1211
HGNC (Hugo) CRACD
HGNC Alias symbCRAD
HGNC Alias namecancer-related regulator of actin dynamics
HGNC Previous nameKIAA1211
HGNC Previous nameKIAA1211
LocusID (NCBI) 57482
Atlas_Id 58156
Location 4q12  [Link to chromosome band 4q12]
Location_base_pair Starts at 56170195 and ends at 56330724 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

Nomenclature
HGNC (Hugo)CRACD   29219
Cards
Entrez_Gene (NCBI)CRACD  57482  capping protein inhibiting regulator of actin dynamics
AliasesCRAD; KIAA1211
GeneCards (Weizmann)CRACD
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr4:56170195-56330724 [Contig_View]  CRACD [Vega]
TCGA cBioPortalCRACD
AceView (NCBI)CRACD
Genatlas (Paris)CRACD
WikiGenes57482
SOURCE (Princeton)CRACD
Genetics Home Reference (NIH)CRACD
Genomic and cartography
GoldenPath hg38 (UCSC)CRACD  -     chr4:56170195-56330724 +  -   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CRACD  -     -   [Description]    (hg19-Feb_2009)
GoldenPathCRACD - - [CytoView hg19]  CRACD - - [CytoView hg38]
genome Data Viewer NCBICRACD [Mapview hg19]  
OMIM618327   
Gene and transcription
Genbank (Entrez)AB033037 AK097530 AK126014 AK302486 AL110138
RefSeq transcript (Entrez)NM_020722
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CRACD
Gene ExpressionCRACD [ NCBI-GEO ]   CRACD [ EBI - ARRAY_EXPRESS ]   CRACD [ SEEK ]   CRACD [ MEM ]
Gene Expression Viewer (FireBrowse)CRACD [ Firebrowse - Broad ]
GenevisibleExpression of CRACD in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)57482
GTEX Portal (Tissue expression)CRACD
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6ZU35   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6ZU35  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6ZU35
Splice isoforms : SwissVarQ6ZU35
PhosPhoSitePlusQ6ZU35
Domains : Interpro (EBI)DUF4592   
Domain families : Pfam (Sanger)DUF4592 (PF15262)   
Domain families : Pfam (NCBI)pfam15262   
Conserved Domain (NCBI)CRACD
DMDM Disease mutations57482
Blocks (Seattle)CRACD
SuperfamilyQ6ZU35
Peptide AtlasQ6ZU35
IPIIPI00008157   IPI01012677   IPI01015740   
Protein Interaction databases
DIP (DOE-UCLA)Q6ZU35
IntAct (EBI)Q6ZU35
BioGRIDCRACD
STRING (EMBL)CRACD
ZODIACCRACD
Ontologies - Pathways
QuickGOQ6ZU35
Ontology : AmiGOprotein binding  cytosol  epithelial structure maintenance  maintenance of gastrointestinal epithelium  positive regulation of actin filament polymerization  negative regulation of barbed-end actin filament capping  negative regulation of barbed-end actin filament capping  
Ontology : EGO-EBIprotein binding  cytosol  epithelial structure maintenance  maintenance of gastrointestinal epithelium  positive regulation of actin filament polymerization  negative regulation of barbed-end actin filament capping  negative regulation of barbed-end actin filament capping  
NDEx NetworkCRACD
Atlas of Cancer Signalling NetworkCRACD
Wikipedia pathwaysCRACD
Orthology - Evolution
OrthoDB57482
Phylogenetic Trees/Animal Genes : TreeFamCRACD
HOGENOMQ6ZU35
Homologs : HomoloGeneCRACD
Homology/Alignments : Family Browser (UCSC)CRACD
Gene fusions - Rearrangements
Fusion : QuiverCRACD
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCRACD [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CRACD
dbVarCRACD
ClinVarCRACD
MonarchCRACD
1000_GenomesCRACD 
Exome Variant ServerCRACD
Varsome BrowserCRACD
Genetic variants : HAPMAP57482
Genomic Variants (DGV)CRACD [DGVbeta]
DECIPHERCRACD [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCRACD 
Mutations
ICGC Data PortalCRACD 
TCGA Data PortalCRACD 
Broad Tumor PortalCRACD
OASIS PortalCRACD [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDCRACD
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch CRACD
DgiDB (Drug Gene Interaction Database)CRACD
DoCM (Curated mutations)CRACD (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CRACD (select a term)
intoGenCRACD
Cancer3DCRACD(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM618327   
Orphanet
DisGeNETCRACD
MedgenCRACD
Genetic Testing Registry CRACD
NextProtQ6ZU35 [Medical]
TSGene57482
GENETestsCRACD
Target ValidationCRACD
Huge Navigator CRACD [HugePedia]
snp3D : Map Gene to Disease57482
BioCentury BCIQCRACD
ClinGenCRACD
Clinical trials, drugs, therapy
Protein Interactions : CTD57482
Clinical trialCRACD
Miscellaneous
canSAR (ICR)CRACD (select the gene name)
HarmonizomeCRACD
DataMed IndexCRACD
Probes
Litterature
PubMed21 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCRACD
EVEXCRACD
GoPubMedCRACD
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 14 14:07:12 CEST 2020

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