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CRCP (CGRP receptor component)

Identity

Alias_symbol (synonym)CGRP-RCP
RCP
RCP9
Other aliasCGRPRCP
HGNC (Hugo) CRCP
LocusID (NCBI) 27297
Atlas_Id 54236
Location 7q11.21  [Link to chromosome band 7q11]
Location_base_pair Starts at 66114818 and ends at 66154566 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
ASL (7q11.21) / CRCP (7q11.21)CRCP (7q11.21) / PIK3AP1 (10q24.1)FAM120AOS (9q22.31) / CRCP (7q11.21)
RAPGEF6 (5q31.1) / CRCP (7q11.21)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CRCP   17888
Cards
Entrez_Gene (NCBI)CRCP  27297  CGRP receptor component
AliasesCGRP-RCP; CGRPRCP; RCP; RCP9
GeneCards (Weizmann)CRCP
Ensembl hg19 (Hinxton)ENSG00000241258 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000241258 [Gene_View]  chr7:66114818-66154566 [Contig_View]  CRCP [Vega]
ICGC DataPortalENSG00000241258
TCGA cBioPortalCRCP
AceView (NCBI)CRCP
Genatlas (Paris)CRCP
WikiGenes27297
SOURCE (Princeton)CRCP
Genetics Home Reference (NIH)CRCP
Genomic and cartography
GoldenPath hg38 (UCSC)CRCP  -     chr7:66114818-66154566 +  7q11.21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CRCP  -     7q11.21   [Description]    (hg19-Feb_2009)
EnsemblCRCP - 7q11.21 [CytoView hg19]  CRCP - 7q11.21 [CytoView hg38]
Mapping of homologs : NCBICRCP [Mapview hg19]  CRCP [Mapview hg38]
OMIM606121   
Gene and transcription
Genbank (Entrez)AF073792 AK023295 AK290553 AK303737 AK311829
RefSeq transcript (Entrez)NM_001040647 NM_001040648 NM_001142414 NM_014478
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CRCP
Cluster EST : UnigeneHs.300684 [ NCBI ]
CGAP (NCI)Hs.300684
Alternative Splicing GalleryENSG00000241258
Gene ExpressionCRCP [ NCBI-GEO ]   CRCP [ EBI - ARRAY_EXPRESS ]   CRCP [ SEEK ]   CRCP [ MEM ]
Gene Expression Viewer (FireBrowse)CRCP [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)27297
GTEX Portal (Tissue expression)CRCP
Protein : pattern, domain, 3D structure
UniProt/SwissProtO75575   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO75575  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO75575
Splice isoforms : SwissVarO75575
PhosPhoSitePlusO75575
Domains : Interpro (EBI)HRDC-like    RNA_pol_II_Rpb4    RNA_pol_II_Rpb4_core   
Domain families : Pfam (Sanger)RNA_pol_Rpb4 (PF03874)   
Domain families : Pfam (NCBI)pfam03874   
Domain families : Smart (EMBL)RPOL4c (SM00657)  
Conserved Domain (NCBI)CRCP
DMDM Disease mutations27297
Blocks (Seattle)CRCP
SuperfamilyO75575
Human Protein AtlasENSG00000241258
Peptide AtlasO75575
HPRD12089
IPIIPI00004477   IPI00335708   IPI00926180   IPI00927312   IPI00759701   
Protein Interaction databases
DIP (DOE-UCLA)O75575
IntAct (EBI)O75575
FunCoupENSG00000241258
BioGRIDCRCP
STRING (EMBL)CRCP
ZODIACCRCP
Ontologies - Pathways
QuickGOO75575
Ontology : AmiGOnucleotide binding  RNA polymerase III activity  calcitonin gene-related peptide receptor activity  acrosomal vesicle  DNA-directed 5'-3' RNA polymerase activity  protein binding  nucleoplasm  DNA-directed RNA polymerase III complex  cytosol  plasma membrane  transcription from RNA polymerase III promoter  transcription initiation from RNA polymerase III promoter  neuropeptide signaling pathway  DNA polymerase III complex  positive regulation of type I interferon production  innate immune response  defense response to virus  
Ontology : EGO-EBInucleotide binding  RNA polymerase III activity  calcitonin gene-related peptide receptor activity  acrosomal vesicle  DNA-directed 5'-3' RNA polymerase activity  protein binding  nucleoplasm  DNA-directed RNA polymerase III complex  cytosol  plasma membrane  transcription from RNA polymerase III promoter  transcription initiation from RNA polymerase III promoter  neuropeptide signaling pathway  DNA polymerase III complex  positive regulation of type I interferon production  innate immune response  defense response to virus  
NDEx NetworkCRCP
Atlas of Cancer Signalling NetworkCRCP
Wikipedia pathwaysCRCP
Orthology - Evolution
OrthoDB27297
GeneTree (enSembl)ENSG00000241258
Phylogenetic Trees/Animal Genes : TreeFamCRCP
HOVERGENO75575
HOGENOMO75575
Homologs : HomoloGeneCRCP
Homology/Alignments : Family Browser (UCSC)CRCP
Gene fusions - Rearrangements
Fusion : MitelmanASL/CRCP [7q11.21/7q11.21]  [t(7;7)(q11;q11)]  
Fusion : MitelmanCRCP/PIK3AP1 [7q11.21/10q24.1]  [t(7;10)(q11;q24)]  
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCRCP [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CRCP
dbVarCRCP
ClinVarCRCP
1000_GenomesCRCP 
Exome Variant ServerCRCP
ExAC (Exome Aggregation Consortium)CRCP (select the gene name)
Genetic variants : HAPMAP27297
Genomic Variants (DGV)CRCP [DGVbeta]
DECIPHERCRCP [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCRCP 
Mutations
ICGC Data PortalCRCP 
TCGA Data PortalCRCP 
Broad Tumor PortalCRCP
OASIS PortalCRCP [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCRCP  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDCRCP
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch CRCP
DgiDB (Drug Gene Interaction Database)CRCP
DoCM (Curated mutations)CRCP (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CRCP (select a term)
intoGenCRCP
Cancer3DCRCP(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM606121   
Orphanet
MedgenCRCP
Genetic Testing Registry CRCP
NextProtO75575 [Medical]
TSGene27297
GENETestsCRCP
Target ValidationCRCP
Huge Navigator CRCP [HugePedia]
snp3D : Map Gene to Disease27297
BioCentury BCIQCRCP
ClinGenCRCP
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD27297
Chemical/Pharm GKB GenePA164718123
Clinical trialCRCP
Miscellaneous
canSAR (ICR)CRCP (select the gene name)
Probes
Litterature
PubMed33 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCRCP
EVEXCRCP
GoPubMedCRCP
iHOPCRCP
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Aug 1 16:58:35 CEST 2017

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