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CREG1 (cellular repressor of E1A stimulated genes 1)

Identity

Alias_namesCREG
cellular repressor of E1A-stimulated genes
Other alias
HGNC (Hugo) CREG1
LocusID (NCBI) 8804
Atlas_Id 40146
Location 1q24.2  [Link to chromosome band 1q24]
Location_base_pair Starts at 167510251 and ends at 167523056 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CREG1   2351
Cards
Entrez_Gene (NCBI)CREG1  8804  cellular repressor of E1A stimulated genes 1
AliasesCREG
GeneCards (Weizmann)CREG1
Ensembl hg19 (Hinxton)ENSG00000143162 [Gene_View]  chr1:167510251-167523056 [Contig_View]  CREG1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000143162 [Gene_View]  chr1:167510251-167523056 [Contig_View]  CREG1 [Vega]
ICGC DataPortalENSG00000143162
TCGA cBioPortalCREG1
AceView (NCBI)CREG1
Genatlas (Paris)CREG1
WikiGenes8804
SOURCE (Princeton)CREG1
Genetics Home Reference (NIH)CREG1
Genomic and cartography
GoldenPath hg19 (UCSC)CREG1  -     chr1:167510251-167523056 -  1q24.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)CREG1  -     1q24.2   [Description]    (hg38-Dec_2013)
EnsemblCREG1 - 1q24.2 [CytoView hg19]  CREG1 - 1q24.2 [CytoView hg38]
Mapping of homologs : NCBICREG1 [Mapview hg19]  CREG1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF084523 AK075375 AK095456 AK130006 AK315497
RefSeq transcript (Entrez)NM_003851
RefSeq genomic (Entrez)NC_000001 NC_018912 NT_004487 NW_004929293
Consensus coding sequences : CCDS (NCBI)CREG1
Cluster EST : UnigeneHs.5710 [ NCBI ]
CGAP (NCI)Hs.5710
Alternative Splicing GalleryENSG00000143162
Gene ExpressionCREG1 [ NCBI-GEO ]   CREG1 [ EBI - ARRAY_EXPRESS ]   CREG1 [ SEEK ]   CREG1 [ MEM ]
Gene Expression Viewer (FireBrowse)CREG1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)8804
GTEX Portal (Tissue expression)CREG1
Protein : pattern, domain, 3D structure
UniProt/SwissProtO75629   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO75629  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO75629
Splice isoforms : SwissVarO75629
PhosPhoSitePlusO75629
Domains : Interpro (EBI)CREG    Split_barrel_FMN-bd   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CREG1
DMDM Disease mutations8804
Blocks (Seattle)CREG1
PDB (SRS)1XHN   
PDB (PDBSum)1XHN   
PDB (IMB)1XHN   
PDB (RSDB)1XHN   
Structural Biology KnowledgeBase1XHN   
SCOP (Structural Classification of Proteins)1XHN   
CATH (Classification of proteins structures)1XHN   
SuperfamilyO75629
Human Protein AtlasENSG00000143162
Peptide AtlasO75629
HPRD09897
IPIIPI00021997   
Protein Interaction databases
DIP (DOE-UCLA)O75629
IntAct (EBI)O75629
FunCoupENSG00000143162
BioGRIDCREG1
STRING (EMBL)CREG1
ZODIACCREG1
Ontologies - Pathways
QuickGOO75629
Ontology : AmiGOtranscription corepressor activity  extracellular space  transcription factor complex  regulation of transcription from RNA polymerase II promoter  multicellular organism development  transcription factor binding  cell proliferation  FMN binding  oxidoreductase activity  regulation of growth  oxidation-reduction process  extracellular exosome  negative regulation of nucleic acid-templated transcription  
Ontology : EGO-EBItranscription corepressor activity  extracellular space  transcription factor complex  regulation of transcription from RNA polymerase II promoter  multicellular organism development  transcription factor binding  cell proliferation  FMN binding  oxidoreductase activity  regulation of growth  oxidation-reduction process  extracellular exosome  negative regulation of nucleic acid-templated transcription  
NDEx NetworkCREG1
Atlas of Cancer Signalling NetworkCREG1
Wikipedia pathwaysCREG1
Orthology - Evolution
OrthoDB8804
GeneTree (enSembl)ENSG00000143162
Phylogenetic Trees/Animal Genes : TreeFamCREG1
HOVERGENO75629
HOGENOMO75629
Homologs : HomoloGeneCREG1
Homology/Alignments : Family Browser (UCSC)CREG1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCREG1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CREG1
dbVarCREG1
ClinVarCREG1
1000_GenomesCREG1 
Exome Variant ServerCREG1
ExAC (Exome Aggregation Consortium)CREG1 (select the gene name)
Genetic variants : HAPMAP8804
Genomic Variants (DGV)CREG1 [DGVbeta]
DECIPHER (Syndromes)1:167510251-167523056  ENSG00000143162
CONAN: Copy Number AnalysisCREG1 
Mutations
ICGC Data PortalCREG1 
TCGA Data PortalCREG1 
Broad Tumor PortalCREG1
OASIS PortalCREG1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCREG1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDCREG1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch CREG1
DgiDB (Drug Gene Interaction Database)CREG1
DoCM (Curated mutations)CREG1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CREG1 (select a term)
intoGenCREG1
Cancer3DCREG1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenCREG1
Genetic Testing Registry CREG1
NextProtO75629 [Medical]
TSGene8804
GENETestsCREG1
Huge Navigator CREG1 [HugePedia]
snp3D : Map Gene to Disease8804
BioCentury BCIQCREG1
ClinGenCREG1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD8804
Chemical/Pharm GKB GenePA26869
Clinical trialCREG1
Miscellaneous
canSAR (ICR)CREG1 (select the gene name)
Probes
Litterature
PubMed34 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCREG1
EVEXCREG1
GoPubMedCREG1
iHOPCREG1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 13:01:43 CET 2017

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