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CREG2 (cellular repressor of E1A stimulated genes 2)

Identity

Other alias-
HGNC (Hugo) CREG2
LocusID (NCBI) 200407
Atlas_Id 62083
Location 2q11.2  [Link to chromosome band 2q11]
Location_base_pair Starts at 101348354 and ends at 101387503 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
TLK1 (2q31.1) / CREG2 (2q11.2)USP14 (18p11.32) / CREG2 (2q11.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CREG2   14272
Cards
Entrez_Gene (NCBI)CREG2  200407  cellular repressor of E1A stimulated genes 2
Aliases
GeneCards (Weizmann)CREG2
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr2:101348354-101387503 [Contig_View]  CREG2 [Vega]
TCGA cBioPortalCREG2
AceView (NCBI)CREG2
Genatlas (Paris)CREG2
WikiGenes200407
SOURCE (Princeton)CREG2
Genetics Home Reference (NIH)CREG2
Genomic and cartography
GoldenPath hg38 (UCSC)CREG2  -     chr2:101348354-101387503 -  2q11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CREG2  -     2q11.2   [Description]    (hg19-Feb_2009)
EnsemblCREG2 - 2q11.2 [CytoView hg19]  CREG2 - 2q11.2 [CytoView hg38]
Mapping of homologs : NCBICREG2 [Mapview hg19]  CREG2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB046109 AK094970 BC032949 BC047514
RefSeq transcript (Entrez)NM_153836
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CREG2
Cluster EST : UnigeneHs.732289 [ NCBI ]
CGAP (NCI)Hs.732289
Gene ExpressionCREG2 [ NCBI-GEO ]   CREG2 [ EBI - ARRAY_EXPRESS ]   CREG2 [ SEEK ]   CREG2 [ MEM ]
Gene Expression Viewer (FireBrowse)CREG2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)200407
GTEX Portal (Tissue expression)CREG2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8IUH2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8IUH2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8IUH2
Splice isoforms : SwissVarQ8IUH2
PhosPhoSitePlusQ8IUH2
Domains : Interpro (EBI)CREG    Split_barrel_FMN-bd   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CREG2
DMDM Disease mutations200407
Blocks (Seattle)CREG2
SuperfamilyQ8IUH2
Peptide AtlasQ8IUH2
HPRD16753
IPIIPI00166776   
Protein Interaction databases
DIP (DOE-UCLA)Q8IUH2
IntAct (EBI)Q8IUH2
BioGRIDCREG2
STRING (EMBL)CREG2
ZODIACCREG2
Ontologies - Pathways
QuickGOQ8IUH2
Ontology : AmiGOextracellular region  endoplasmic reticulum  Golgi apparatus  FMN binding  oxidoreductase activity  oxidation-reduction process  
Ontology : EGO-EBIextracellular region  endoplasmic reticulum  Golgi apparatus  FMN binding  oxidoreductase activity  oxidation-reduction process  
NDEx NetworkCREG2
Atlas of Cancer Signalling NetworkCREG2
Wikipedia pathwaysCREG2
Orthology - Evolution
OrthoDB200407
Phylogenetic Trees/Animal Genes : TreeFamCREG2
HOVERGENQ8IUH2
HOGENOMQ8IUH2
Homologs : HomoloGeneCREG2
Homology/Alignments : Family Browser (UCSC)CREG2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCREG2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CREG2
dbVarCREG2
ClinVarCREG2
1000_GenomesCREG2 
Exome Variant ServerCREG2
ExAC (Exome Aggregation Consortium)CREG2 (select the gene name)
Genetic variants : HAPMAP200407
Genomic Variants (DGV)CREG2 [DGVbeta]
DECIPHERCREG2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCREG2 
Mutations
ICGC Data PortalCREG2 
TCGA Data PortalCREG2 
Broad Tumor PortalCREG2
OASIS PortalCREG2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCREG2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDCREG2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch CREG2
DgiDB (Drug Gene Interaction Database)CREG2
DoCM (Curated mutations)CREG2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CREG2 (select a term)
intoGenCREG2
Cancer3DCREG2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenCREG2
Genetic Testing Registry CREG2
NextProtQ8IUH2 [Medical]
TSGene200407
GENETestsCREG2
Target ValidationCREG2
Huge Navigator CREG2 [HugePedia]
snp3D : Map Gene to Disease200407
BioCentury BCIQCREG2
ClinGenCREG2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD200407
Chemical/Pharm GKB GenePA134876243
Clinical trialCREG2
Miscellaneous
canSAR (ICR)CREG2 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCREG2
EVEXCREG2
GoPubMedCREG2
iHOPCREG2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:44:31 CEST 2017

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