Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

CRHR1-IT1 (-)

Identity

Alias_namesC17orf69
chromosome 17 open reading frame 69
CRHR1 intronic transcript 1 (non-protein coding)
Alias_symbol (synonym)FLJ25168
Other alias-
HGNC (Hugo) -
LocusID (NCBI) 147081
Atlas_Id 54237
Location -  [Link to chromosome band ]
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


Other Solid tumors implicated (Data extracted from papers in the Atlas) [ 1 ]
  Lung: Translocations in Squamous Cell Carcinoma


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)CRHR1-IT1  147081  -
Aliases
GeneCards (Weizmann)CRHR1-IT1
Ensembl hg19 (Hinxton)ENSG00000204650 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000204650 [Gene_View]  - [Contig_View]  CRHR1-IT1 [Vega]
ICGC DataPortalENSG00000204650
TCGA cBioPortalCRHR1-IT1
AceView (NCBI)CRHR1-IT1
Genatlas (Paris)CRHR1-IT1
WikiGenes147081
SOURCE (Princeton)CRHR1-IT1
Genetics Home Reference (NIH)CRHR1-IT1
Genomic and cartography
GoldenPath hg38 (UCSC)CRHR1-IT1  -  
GoldenPath hg19 (UCSC)CRHR1-IT1  -  
EnsemblCRHR1-IT1 - [CytoView hg19]  CRHR1-IT1 - [CytoView hg38]
Mapping of homologs : NCBICRHR1-IT1 [Mapview hg19]  CRHR1-IT1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CRHR1-IT1
Alternative Splicing GalleryENSG00000204650
Gene ExpressionCRHR1-IT1 [ NCBI-GEO ]   CRHR1-IT1 [ EBI - ARRAY_EXPRESS ]   CRHR1-IT1 [ SEEK ]   CRHR1-IT1 [ MEM ]
Gene Expression Viewer (FireBrowse)CRHR1-IT1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)147081
GTEX Portal (Tissue expression)CRHR1-IT1
Human Protein AtlasENSG00000204650-CRHR1-IT1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CRHR1-IT1
DMDM Disease mutations147081
Blocks (Seattle)CRHR1-IT1
Human Protein Atlas [tissue]ENSG00000204650-CRHR1-IT1 [tissue]
HPRD08052
Protein Interaction databases
FunCoupENSG00000204650
BioGRIDCRHR1-IT1
STRING (EMBL)CRHR1-IT1
ZODIACCRHR1-IT1
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease147081
BioCentury BCIQCRHR1-IT1
ClinGenCRHR1-IT1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD147081
Clinical trialCRHR1-IT1
Miscellaneous
canSAR (ICR)CRHR1-IT1 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineCRHR1-IT1
EVEXCRHR1-IT1
GoPubMedCRHR1-IT1
iHOPCRHR1-IT1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 14:09:01 CET 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.