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CRIP2 (cysteine rich protein 2)

Identity

Alias_symbol (synonym)CRP2
ESP1
Other aliasCRIP
HGNC (Hugo) CRIP2
LocusID (NCBI) 1397
Atlas_Id 52310
Location 14q32.33  [Link to chromosome band 14q32]
Location_base_pair Starts at 105939275 and ends at 105946507 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
CRIP2 (14q32.33) / CRIP2 (14q32.33)CRIP2 (14q32.33) / KIF20B (10q23.31)CRIP2 (14q32.33) / NAP1L4 (11p15.4)
SAA1 (11p15.1) / CRIP2 (14q32.33)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CRIP2   2361
Cards
Entrez_Gene (NCBI)CRIP2  1397  cysteine rich protein 2
AliasesCRIP; CRP2; ESP1
GeneCards (Weizmann)CRIP2
Ensembl hg19 (Hinxton)ENSG00000182809 [Gene_View]  chr14:105939275-105946507 [Contig_View]  CRIP2 [Vega]
Ensembl hg38 (Hinxton)ENSG00000182809 [Gene_View]  chr14:105939275-105946507 [Contig_View]  CRIP2 [Vega]
ICGC DataPortalENSG00000182809
TCGA cBioPortalCRIP2
AceView (NCBI)CRIP2
Genatlas (Paris)CRIP2
WikiGenes1397
SOURCE (Princeton)CRIP2
Genetics Home Reference (NIH)CRIP2
Genomic and cartography
GoldenPath hg19 (UCSC)CRIP2  -     chr14:105939275-105946507 +  14q32.33   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)CRIP2  -     14q32.33   [Description]    (hg38-Dec_2013)
EnsemblCRIP2 - 14q32.33 [CytoView hg19]  CRIP2 - 14q32.33 [CytoView hg38]
Mapping of homologs : NCBICRIP2 [Mapview hg19]  CRIP2 [Mapview hg38]
OMIM601183   
Gene and transcription
Genbank (Entrez)AK057837 AK091845 AK223251 AK300092 AK311402
RefSeq transcript (Entrez)NM_001270837 NM_001270841 NM_001312
RefSeq genomic (Entrez)NC_000014 NC_018925 NT_026437 NW_004929393
Consensus coding sequences : CCDS (NCBI)CRIP2
Cluster EST : UnigeneHs.534309 [ NCBI ]
CGAP (NCI)Hs.534309
Alternative Splicing GalleryENSG00000182809
Gene ExpressionCRIP2 [ NCBI-GEO ]   CRIP2 [ EBI - ARRAY_EXPRESS ]   CRIP2 [ SEEK ]   CRIP2 [ MEM ]
Gene Expression Viewer (FireBrowse)CRIP2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)1397
GTEX Portal (Tissue expression)CRIP2
Protein : pattern, domain, 3D structure
UniProt/SwissProtP52943   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP52943  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP52943
Splice isoforms : SwissVarP52943
PhosPhoSitePlusP52943
Domaine pattern : Prosite (Expaxy)LIM_DOMAIN_1 (PS00478)    LIM_DOMAIN_2 (PS50023)   
Domains : Interpro (EBI)Znf_LIM   
Domain families : Pfam (Sanger)LIM (PF00412)   
Domain families : Pfam (NCBI)pfam00412   
Domain families : Smart (EMBL)LIM (SM00132)  
Conserved Domain (NCBI)CRIP2
DMDM Disease mutations1397
Blocks (Seattle)CRIP2
PDB (SRS)2CU8   
PDB (PDBSum)2CU8   
PDB (IMB)2CU8   
PDB (RSDB)2CU8   
Structural Biology KnowledgeBase2CU8   
SCOP (Structural Classification of Proteins)2CU8   
CATH (Classification of proteins structures)2CU8   
SuperfamilyP52943
Human Protein AtlasENSG00000182809
Peptide AtlasP52943
HPRD03113
IPIIPI00006034   IPI00921911   IPI01021435   IPI01018120   
Protein Interaction databases
DIP (DOE-UCLA)P52943
IntAct (EBI)P52943
FunCoupENSG00000182809
BioGRIDCRIP2
STRING (EMBL)CRIP2
ZODIACCRIP2
Ontologies - Pathways
QuickGOP52943
Ontology : AmiGOcell cortex  zinc ion binding  positive regulation of cell proliferation  hemopoiesis  extracellular matrix  
Ontology : EGO-EBIcell cortex  zinc ion binding  positive regulation of cell proliferation  hemopoiesis  extracellular matrix  
NDEx NetworkCRIP2
Atlas of Cancer Signalling NetworkCRIP2
Wikipedia pathwaysCRIP2
Orthology - Evolution
OrthoDB1397
GeneTree (enSembl)ENSG00000182809
Phylogenetic Trees/Animal Genes : TreeFamCRIP2
HOVERGENP52943
HOGENOMP52943
Homologs : HomoloGeneCRIP2
Homology/Alignments : Family Browser (UCSC)CRIP2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCRIP2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CRIP2
dbVarCRIP2
ClinVarCRIP2
1000_GenomesCRIP2 
Exome Variant ServerCRIP2
ExAC (Exome Aggregation Consortium)CRIP2 (select the gene name)
Genetic variants : HAPMAP1397
Genomic Variants (DGV)CRIP2 [DGVbeta]
DECIPHER (Syndromes)14:105939275-105946507  ENSG00000182809
CONAN: Copy Number AnalysisCRIP2 
Mutations
ICGC Data PortalCRIP2 
TCGA Data PortalCRIP2 
Broad Tumor PortalCRIP2
OASIS PortalCRIP2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCRIP2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDCRIP2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch CRIP2
DgiDB (Drug Gene Interaction Database)CRIP2
DoCM (Curated mutations)CRIP2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CRIP2 (select a term)
intoGenCRIP2
Cancer3DCRIP2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM601183   
Orphanet
MedgenCRIP2
Genetic Testing Registry CRIP2
NextProtP52943 [Medical]
TSGene1397
GENETestsCRIP2
Huge Navigator CRIP2 [HugePedia]
snp3D : Map Gene to Disease1397
BioCentury BCIQCRIP2
ClinGenCRIP2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD1397
Chemical/Pharm GKB GenePA26879
Clinical trialCRIP2
Miscellaneous
canSAR (ICR)CRIP2 (select the gene name)
Probes
Litterature
PubMed26 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCRIP2
EVEXCRIP2
GoPubMedCRIP2
iHOPCRIP2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Mar 30 14:57:37 CEST 2017

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