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CRIP3 (cysteine rich protein 3)

Identity

Alias (NCBI)CRP-3
TLP
TLP-A
h6LIMo
HGNC (Hugo) CRIP3
HGNC Alias symbTLP-A
bA480N24.2
TLP
LocusID (NCBI) 401262
Atlas_Id 62086
Location 6p21.1  [Link to chromosome band 6p21]
Location_base_pair Starts at 43305472 and ends at 43308826 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
CRIP3 (6p21.1) / CRIP3 (6p21.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)CRIP3   17751
Cards
Entrez_Gene (NCBI)CRIP3    cysteine rich protein 3
AliasesCRP-3; TLP; TLP-A; h6LIMo
GeneCards (Weizmann)CRIP3
Ensembl hg19 (Hinxton)ENSG00000146215 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000146215 [Gene_View]  ENSG00000146215 [Sequence]  chr6:43305472-43308826 [Contig_View]  CRIP3 [Vega]
ICGC DataPortalENSG00000146215
TCGA cBioPortalCRIP3
AceView (NCBI)CRIP3
Genatlas (Paris)CRIP3
SOURCE (Princeton)CRIP3
Genetics Home Reference (NIH)CRIP3
Genomic and cartography
GoldenPath hg38 (UCSC)CRIP3  -     chr6:43305472-43308826 -  6p21.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CRIP3  -     6p21.1   [Description]    (hg19-Feb_2009)
GoldenPathCRIP3 - 6p21.1 [CytoView hg19]  CRIP3 - 6p21.1 [CytoView hg38]
ImmunoBaseENSG00000146215
Genome Data Viewer NCBICRIP3 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AA813350 AI042209 AY555741 AY555742 AY555743
RefSeq transcript (Entrez)NM_001366068 NM_206922
Consensus coding sequences : CCDS (NCBI)CRIP3
Gene ExpressionCRIP3 [ NCBI-GEO ]   CRIP3 [ EBI - ARRAY_EXPRESS ]   CRIP3 [ SEEK ]   CRIP3 [ MEM ]
Gene Expression Viewer (FireBrowse)CRIP3 [ Firebrowse - Broad ]
GenevisibleExpression of CRIP3 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)401262
GTEX Portal (Tissue expression)CRIP3
Human Protein AtlasENSG00000146215-CRIP3 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6Q6R5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6Q6R5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6Q6R5
PhosPhoSitePlusQ6Q6R5
Domaine pattern : Prosite (Expaxy)LIM_DOMAIN_1 (PS00478)    LIM_DOMAIN_2 (PS50023)   
Domains : Interpro (EBI)Znf_LIM   
Domain families : Pfam (Sanger)LIM (PF00412)   
Domain families : Pfam (NCBI)pfam00412   
Domain families : Smart (EMBL)LIM (SM00132)  
Conserved Domain (NCBI)CRIP3
SuperfamilyQ6Q6R5
AlphaFold pdb e-kbQ6Q6R5   
Human Protein Atlas [tissue]ENSG00000146215-CRIP3 [tissue]
HPRD16755
Protein Interaction databases
DIP (DOE-UCLA)Q6Q6R5
IntAct (EBI)Q6Q6R5
BioGRIDCRIP3
STRING (EMBL)CRIP3
ZODIACCRIP3
Ontologies - Pathways
QuickGOQ6Q6R5
Ontology : AmiGOcytoplasm  metal ion binding  
Ontology : EGO-EBIcytoplasm  metal ion binding  
NDEx NetworkCRIP3
Atlas of Cancer Signalling NetworkCRIP3
Wikipedia pathwaysCRIP3
Orthology - Evolution
OrthoDB401262
GeneTree (enSembl)ENSG00000146215
Phylogenetic Trees/Animal Genes : TreeFamCRIP3
Homologs : HomoloGeneCRIP3
Homology/Alignments : Family Browser (UCSC)CRIP3
Gene fusions - Rearrangements
Fusion : QuiverCRIP3
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCRIP3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CRIP3
dbVarCRIP3
ClinVarCRIP3
MonarchCRIP3
1000_GenomesCRIP3 
Exome Variant ServerCRIP3
GNOMAD BrowserENSG00000146215
Varsome BrowserCRIP3
ACMGCRIP3 variants
VarityQ6Q6R5
Genomic Variants (DGV)CRIP3 [DGVbeta]
DECIPHERCRIP3 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCRIP3 
Mutations
ICGC Data PortalCRIP3 
TCGA Data PortalCRIP3 
Broad Tumor PortalCRIP3
OASIS PortalCRIP3 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCRIP3  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DCRIP3
Mutations and Diseases : HGMDCRIP3
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaCRIP3
DgiDB (Drug Gene Interaction Database)CRIP3
DoCM (Curated mutations)CRIP3
CIViC (Clinical Interpretations of Variants in Cancer)CRIP3
Cancer3DCRIP3
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETCRIP3
MedgenCRIP3
Genetic Testing Registry CRIP3
NextProtQ6Q6R5 [Medical]
GENETestsCRIP3
Target ValidationCRIP3
Huge Navigator CRIP3 [HugePedia]
ClinGenCRIP3
Clinical trials, drugs, therapy
MyCancerGenomeCRIP3
Protein Interactions : CTDCRIP3
Pharm GKB GenePA134929489
PharosQ6Q6R5
Clinical trialCRIP3
Miscellaneous
canSAR (ICR)CRIP3
HarmonizomeCRIP3
DataMed IndexCRIP3
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXCRIP3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:46:47 CEST 2021

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