Atlas of Genetics and Cytogenetics in Oncology and Haematology


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CRPPA (CDP-L-ribitol pyrophosphorylase A)

Identity

Other aliasISPD
LGMDR20
MDDGA7
MDDGC7
Nip
hISPD
HGNC (Hugo) CRPPA
LocusID (NCBI) 729920
Atlas_Id 54386
Location 7p21.2  [Link to chromosome band 7p21]
Location_base_pair Starts at 16087525 and ends at 16421538 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



Other Solid tumors implicated (Data extracted from papers in the Atlas) [ 2 ]
  Lung: Translocations in Small Cell Carcinoma
del(7)(p21p21) ANKMY2/ISPD


External links

Nomenclature
HGNC (Hugo)CRPPA   37276
Cards
Entrez_Gene (NCBI)CRPPA  729920  CDP-L-ribitol pyrophosphorylase A
AliasesISPD; LGMDR20; MDDGA7; MDDGC7; 
Nip; hISPD
GeneCards (Weizmann)CRPPA
Ensembl hg19 (Hinxton)ENSG00000214960 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000214960 [Gene_View]  ENSG00000214960 [Sequence]  chr7:16087525-16421538 [Contig_View]  CRPPA [Vega]
ICGC DataPortalENSG00000214960
TCGA cBioPortalCRPPA
AceView (NCBI)CRPPA
Genatlas (Paris)CRPPA
WikiGenes729920
SOURCE (Princeton)CRPPA
Genetics Home Reference (NIH)CRPPA
Genomic and cartography
GoldenPath hg38 (UCSC)CRPPA  -     chr7:16087525-16421538 -  -   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CRPPA  -     -   [Description]    (hg19-Feb_2009)
GoldenPathCRPPA - - [CytoView hg19]  CRPPA - - [CytoView hg38]
ImmunoBaseENSG00000214960
Mapping of homologs : NCBICRPPA [Mapview hg19]  CRPPA [Mapview hg38]
OMIM614631   614643   616052   
Gene and transcription
Genbank (Entrez)AK124805 BE092109 DT932748 DY654823 HM005410
RefSeq transcript (Entrez)NM_001101417 NM_001101426 NM_001368197
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CRPPA
Alternative Splicing GalleryENSG00000214960
Gene ExpressionCRPPA [ NCBI-GEO ]   CRPPA [ EBI - ARRAY_EXPRESS ]   CRPPA [ SEEK ]   CRPPA [ MEM ]
Gene Expression Viewer (FireBrowse)CRPPA [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)729920
GTEX Portal (Tissue expression)CRPPA
Human Protein AtlasENSG00000214960-CRPPA [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CRPPA
DMDM Disease mutations729920
Blocks (Seattle)CRPPA
Human Protein Atlas [tissue]ENSG00000214960-CRPPA [tissue]
Protein Interaction databases
FunCoupENSG00000214960
BioGRIDCRPPA
STRING (EMBL)CRPPA
ZODIACCRPPA
Ontologies - Pathways
Huge Navigator CRPPA [HugePedia]
snp3D : Map Gene to Disease729920
BioCentury BCIQCRPPA
ClinGenCRPPA
Clinical trials, drugs, therapy
Protein Interactions : CTD729920
Pharm GKB GenePA165618128
Clinical trialCRPPA
Miscellaneous
canSAR (ICR)CRPPA (select the gene name)
HarmonizomeCRPPA
DataMed IndexCRPPA
Probes
Litterature
PubMed23 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCRPPA
EVEXCRPPA
GoPubMedCRPPA
iHOPCRPPA
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Jun 30 20:13:17 CEST 2020

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