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CRTC3 (CREB regulated transcription coactivator 3)

Identity

Other namesTORC-3
TORC3
HGNC (Hugo) CRTC3
LocusID (NCBI) 64784
Location 15q26.1
Location_base_pair Starts at 91073118 and ends at 91188577 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)CRTC3   26148
Cards
Entrez_Gene (NCBI)CRTC3  64784  CREB regulated transcription coactivator 3
GeneCards (Weizmann)CRTC3
Ensembl (Hinxton)ENSG00000140577 [Gene_View]  chr15:91073118-91188577 [Contig_View]  CRTC3 [Vega]
ICGC DataPortalENSG00000140577
cBioPortalCRTC3
AceView (NCBI)CRTC3
Genatlas (Paris)CRTC3
WikiGenes64784
SOURCE (Princeton)NM_001042574 NM_022769
Genomic and cartography
GoldenPath (UCSC)CRTC3  -  15q26.1   chr15:91073118-91188577 +  15q26.1   [Description]    (hg19-Feb_2009)
EnsemblCRTC3 - 15q26.1 [CytoView]
Mapping of homologs : NCBICRTC3 [Mapview]
OMIM608986   
Gene and transcription
Genbank (Entrez)AI969212 AK025521 AK074170 AK090443 AK225300
RefSeq transcript (Entrez)NM_001042574 NM_022769
RefSeq genomic (Entrez)AC_000147 NC_000015 NC_018926 NT_010194 NW_001838222 NW_004929399
Consensus coding sequences : CCDS (NCBI)CRTC3
Cluster EST : UnigeneHs.567572 [ NCBI ]
CGAP (NCI)Hs.567572
Alternative Splicing : Fast-db (Paris)GSHG0010153
Alternative Splicing GalleryENSG00000140577
Gene ExpressionCRTC3 [ NCBI-GEO ]     CRTC3 [ SEEK ]   CRTC3 [ MEM ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6UUV7 (Uniprot)
NextProtQ6UUV7  [Medical]
With graphics : InterProQ6UUV7
Splice isoforms : SwissVarQ6UUV7 (Swissvar)
Domains : Interpro (EBI)TORC [organisation]   TORC_C [organisation]   TORC_M [organisation]   TORC_N [organisation]  
Related proteins : CluSTrQ6UUV7
Domain families : Pfam (Sanger)TORC_C (PF12886)    TORC_M (PF12885)    TORC_N (PF12884)   
Domain families : Pfam (NCBI)pfam12886    pfam12885    pfam12884   
DMDM Disease mutations64784
Blocks (Seattle)Q6UUV7
Human Protein AtlasENSG00000140577 [gene] [tissue] [antibody] [cell] [cancer]
Peptide AtlasQ6UUV7
HPRD13384
IPIIPI00783045   IPI00784401   IPI00885192   
Protein Interaction databases
DIP (DOE-UCLA)Q6UUV7
IntAct (EBI)Q6UUV7
FunCoupENSG00000140577
BioGRIDCRTC3
InParanoidQ6UUV7
Interologous Interaction database Q6UUV7
IntegromeDBCRTC3
STRING (EMBL)CRTC3
Ontologies - Pathways
Ontology : AmiGOnucleus  nucleolus  cytoplasm  transcription, DNA-templated  cAMP response element binding protein binding  viral process  positive regulation of CREB transcription factor activity  protein homotetramerization  
Ontology : EGO-EBInucleus  nucleolus  cytoplasm  transcription, DNA-templated  cAMP response element binding protein binding  viral process  positive regulation of CREB transcription factor activity  protein homotetramerization  
Pathways : KEGGHTLV-I infection   
Protein Interaction DatabaseCRTC3
Wikipedia pathwaysCRTC3
Gene fusion - rearrangments
Rearrangement : COSMICCRTC3 [15q26.1]  -  MAML2 [11q21]  
  [COSF1104] [COSF1105] 
Rearrangement : TICdbCRTC3 [15q26.1]  -  MAML2 [8q12.1]
Polymorphisms : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)CRTC3
snp3D : Map Gene to Disease64784
SNP (GeneSNP Utah)CRTC3
SNP : HGBaseCRTC3
Genetic variants : HAPMAPCRTC3
Exome VariantCRTC3
1000_GenomesCRTC3 
ICGC programENSG00000140577 
Cancer Gene: CensusCRTC3 
Somatic Mutations in Cancer : COSMICCRTC3 
CONAN: Copy Number AnalysisCRTC3 
Mutations and Diseases : HGMDCRTC3
Mutations and Diseases : intOGenCRTC3
Genomic VariantsCRTC3  CRTC3 [DGVbeta]
dbVarCRTC3
ClinVarCRTC3
Pred. of missensesPolyPhen-2  SIFT(SG)  SIFT(JCVI)  Align-GVGD  MutAssessor  Mutanalyser  
Pred. splicesGeneSplicer  Human Splicing Finder  MaxEntScan  
Diseases
OMIM608986   
MedgenCRTC3
GENETestsCRTC3
Disease Genetic AssociationCRTC3
Huge Navigator CRTC3 [HugePedia]  CRTC3 [HugeCancerGEM]
General knowledge
Homologs : HomoloGeneCRTC3
Homology/Alignments : Family Browser (UCSC)CRTC3
Phylogenetic Trees/Animal Genes : TreeFamCRTC3
Chemical/Protein Interactions : CTD64784
Chemical/Pharm GKB GenePA142672074
Clinical trialCRTC3
Cancer Resource (Charite)ENSG00000140577
Other databases
Probes
Litterature
PubMed26 Pubmed reference(s) in Entrez
CoreMineCRTC3
iHOPCRTC3
OncoSearchCRTC3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated12-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 22 18:46:08 CEST 2014

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