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CSAG2 (CSAG family member 2)

Identity

Alias (NCBI)CSAG3
CSAG3B
CT24.2
TRAG-3
TRAG3
HGNC (Hugo) CSAG2
HGNC Alias symbTRAG3
CT24.2
HGNC Alias namecancer/testis antigen family 24, member 2
HGNC Previous nameCSAG3B
HGNC Previous nameCSAG family, member 3B
 CSAG family, member 2
LocusID (NCBI) 102723547
Atlas_Id 43677
Location Xq28  [Link to chromosome band Xq28]
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

 

Nomenclature
HGNC (Hugo)CSAG2   16847
Cards
Entrez_Gene (NCBI)CSAG2    CSAG family member 2
AliasesCSAG3; CSAG3B; CT24.2; TRAG-3; 
TRAG3
GeneCards (Weizmann)CSAG2
Ensembl hg19 (Hinxton)ENSG00000268902 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000268902 [Gene_View]  ENSG00000268902 [Sequence]  - [Contig_View]  CSAG2 [Vega]
ICGC DataPortalENSG00000268902
TCGA cBioPortalCSAG2
AceView (NCBI)CSAG2
Genatlas (Paris)CSAG2
SOURCE (Princeton)CSAG2
Genetics Home Reference (NIH)CSAG2
Genomic and cartography
GoldenPath hg38 (UCSC)CSAG2  -  
GoldenPath hg19 (UCSC)CSAG2  -  
GoldenPathCSAG2 - [CytoView hg19]  CSAG2 - [CytoView hg38]
ImmunoBaseENSG00000268902
Genome Data Viewer NCBICSAG2 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AF080246 AF268421
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)CSAG2
Gene ExpressionCSAG2 [ NCBI-GEO ]   CSAG2 [ EBI - ARRAY_EXPRESS ]   CSAG2 [ SEEK ]   CSAG2 [ MEM ]
Gene Expression Viewer (FireBrowse)CSAG2 [ Firebrowse - Broad ]
GenevisibleExpression of CSAG2 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)102723547
GTEX Portal (Tissue expression)CSAG2
Human Protein AtlasENSG00000268902-CSAG2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9Y5P2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9Y5P2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9Y5P2
PhosPhoSitePlusQ9Y5P2
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CSAG2
SuperfamilyQ9Y5P2
AlphaFold pdb e-kbQ9Y5P2   
Human Protein Atlas [tissue]ENSG00000268902-CSAG2 [tissue]
Protein Interaction databases
DIP (DOE-UCLA)Q9Y5P2
IntAct (EBI)Q9Y5P2
BioGRIDCSAG2
STRING (EMBL)CSAG2
ZODIACCSAG2
Ontologies - Pathways
QuickGOQ9Y5P2
Ontology : AmiGOprotein binding  response to drug  
Ontology : EGO-EBIprotein binding  response to drug  
NDEx NetworkCSAG2
Atlas of Cancer Signalling NetworkCSAG2
Wikipedia pathwaysCSAG2
Orthology - Evolution
OrthoDB102723547
GeneTree (enSembl)ENSG00000268902
Phylogenetic Trees/Animal Genes : TreeFamCSAG2
Homologs : HomoloGeneCSAG2
Homology/Alignments : Family Browser (UCSC)CSAG2
Gene fusions - Rearrangements
Fusion : QuiverCSAG2
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCSAG2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CSAG2
dbVarCSAG2
ClinVarCSAG2
MonarchCSAG2
1000_GenomesCSAG2 
Exome Variant ServerCSAG2
GNOMAD BrowserENSG00000268902
Varsome BrowserCSAG2
ACMGCSAG2 variants
VarityQ9Y5P2
Genomic Variants (DGV)CSAG2 [DGVbeta]
DECIPHERCSAG2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCSAG2 
Mutations
ICGC Data PortalCSAG2 
TCGA Data PortalCSAG2 
Broad Tumor PortalCSAG2
OASIS PortalCSAG2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCSAG2  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DCSAG2
Mutations and Diseases : HGMDCSAG2
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaCSAG2
DgiDB (Drug Gene Interaction Database)CSAG2
DoCM (Curated mutations)CSAG2
CIViC (Clinical Interpretations of Variants in Cancer)CSAG2
Cancer3DCSAG2
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETCSAG2
MedgenCSAG2
Genetic Testing Registry CSAG2
NextProtQ9Y5P2 [Medical]
GENETestsCSAG2
Target ValidationCSAG2
Huge Navigator CSAG2 [HugePedia]
ClinGenCSAG2
Clinical trials, drugs, therapy
MyCancerGenomeCSAG2
Protein Interactions : CTDCSAG2
Pharm GKB GenePA134919230
PharosQ9Y5P2
Clinical trialCSAG2
Miscellaneous
canSAR (ICR)CSAG2
HarmonizomeCSAG2
DataMed IndexCSAG2
Probes
Litterature
PubMed22 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXCSAG2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 15:05:19 CEST 2021

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