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CSAG2 (CSAG family member 2)

Identity

Alias_namesmember 2
CSAG3B
Alias_symbol (synonym)TRAG3
CT24.2
Other aliasCSAG3
TRAG-3
HGNC (Hugo) CSAG2
LocusID (NCBI) 102723547
Atlas_Id 43677
Location Xq28  [Link to chromosome band Xq28]
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)CSAG2   16847
Cards
Entrez_Gene (NCBI)CSAG2  102723547  CSAG family member 2
AliasesCSAG3; CSAG3B; CT24.2; TRAG-3; 
TRAG3
GeneCards (Weizmann)CSAG2
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  - [Contig_View]  CSAG2 [Vega]
TCGA cBioPortalCSAG2
AceView (NCBI)CSAG2
Genatlas (Paris)CSAG2
WikiGenes102723547
SOURCE (Princeton)CSAG2
Genetics Home Reference (NIH)CSAG2
Genomic and cartography
GoldenPath hg38 (UCSC)CSAG2  -  
GoldenPath hg19 (UCSC)CSAG2  -  
EnsemblCSAG2 - [CytoView hg19]  CSAG2 - [CytoView hg38]
Mapping of homologs : NCBICSAG2 [Mapview hg19]  CSAG2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF080246 AF268421
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CSAG2
Cluster EST : UnigeneHs.735281 [ NCBI ]
CGAP (NCI)Hs.735281
Gene ExpressionCSAG2 [ NCBI-GEO ]   CSAG2 [ EBI - ARRAY_EXPRESS ]   CSAG2 [ SEEK ]   CSAG2 [ MEM ]
Gene Expression Viewer (FireBrowse)CSAG2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)102723547
GTEX Portal (Tissue expression)CSAG2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9Y5P2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9Y5P2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9Y5P2
Splice isoforms : SwissVarQ9Y5P2
PhosPhoSitePlusQ9Y5P2
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CSAG2
DMDM Disease mutations102723547
Blocks (Seattle)CSAG2
SuperfamilyQ9Y5P2
Peptide AtlasQ9Y5P2
Protein Interaction databases
DIP (DOE-UCLA)Q9Y5P2
IntAct (EBI)Q9Y5P2
BioGRIDCSAG2
STRING (EMBL)CSAG2
ZODIACCSAG2
Ontologies - Pathways
QuickGOQ9Y5P2
Ontology : AmiGOresponse to drug  
Ontology : EGO-EBIresponse to drug  
NDEx NetworkCSAG2
Atlas of Cancer Signalling NetworkCSAG2
Wikipedia pathwaysCSAG2
Orthology - Evolution
OrthoDB102723547
Phylogenetic Trees/Animal Genes : TreeFamCSAG2
HOVERGENQ9Y5P2
HOGENOMQ9Y5P2
Homologs : HomoloGeneCSAG2
Homology/Alignments : Family Browser (UCSC)CSAG2
Gene fusions - Rearrangements
Fusion : QuiverCSAG2
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCSAG2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CSAG2
dbVarCSAG2
ClinVarCSAG2
1000_GenomesCSAG2 
Exome Variant ServerCSAG2
Varsome BrowserCSAG2
Genetic variants : HAPMAP102723547
Genomic Variants (DGV)CSAG2 [DGVbeta]
DECIPHERCSAG2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCSAG2 
Mutations
ICGC Data PortalCSAG2 
TCGA Data PortalCSAG2 
Broad Tumor PortalCSAG2
OASIS PortalCSAG2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCSAG2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDCSAG2
BioMutasearch CSAG2
DgiDB (Drug Gene Interaction Database)CSAG2
DoCM (Curated mutations)CSAG2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CSAG2 (select a term)
intoGenCSAG2
Cancer3DCSAG2(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETCSAG2
MedgenCSAG2
Genetic Testing Registry CSAG2
NextProtQ9Y5P2 [Medical]
TSGene102723547
GENETestsCSAG2
Target ValidationCSAG2
Huge Navigator CSAG2 [HugePedia]
snp3D : Map Gene to Disease102723547
BioCentury BCIQCSAG2
ClinGenCSAG2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD102723547
Clinical trialCSAG2
Miscellaneous
canSAR (ICR)CSAG2 (select the gene name)
Probes
Litterature
PubMed21 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCSAG2
EVEXCSAG2
GoPubMedCSAG2
iHOPCSAG2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Aug 27 11:17:20 CEST 2018

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