CSDE1 (cold shock domain containing E1)

2016-01-01  

Identity

HGNC
LOCATION
1p13.2
LOCUSID
ALIAS
D1S155E,UNR
FUSION GENES

Other Information

Locus ID:

NCBI: 7812
MIM: 191510
HGNC: 29905
Ensembl: ENSG00000009307

Variants:

dbSNP: 7812
ClinVar: 7812
TCGA: ENSG00000009307
COSMIC: CSDE1

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000009307ENST00000261443O75534
ENSG00000009307ENST00000261443A0A024R0K2
ENSG00000009307ENST00000339438O75534
ENSG00000009307ENST00000339438A0A024R0K2
ENSG00000009307ENST00000358528O75534
ENSG00000009307ENST00000358528A0A024R0E2
ENSG00000009307ENST00000369530O75534
ENSG00000009307ENST00000438362O75534
ENSG00000009307ENST00000525132E9PJK7
ENSG00000009307ENST00000525878E9PKN4
ENSG00000009307ENST00000525970A0A1Y8EMC9
ENSG00000009307ENST00000529046E9PNG3
ENSG00000009307ENST00000530886E9PLT0
ENSG00000009307ENST00000534389E9PLD4
ENSG00000009307ENST00000534699O75534
ENSG00000009307ENST00000534699A0A024R0E2
ENSG00000009307ENST00000610726O75534

Expression (GTEx)

0
100
200
300
400
500
600
700
800

Protein levels (Protein atlas)

Not detected
Low
Medium
High

References

Pubmed IDYearTitleCitations
126674572003The Apaf-1 internal ribosome entry segment attains the correct structural conformation for function via interactions with PTB and unr.112
199131212009Gene-centric association signals for lipids and apolipoproteins identified via the HumanCVD BeadChip.85
203796142010Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score.62
171599032007A role for hnRNP C1/C2 and Unr in internal initiation of translation during mitosis.40
279087352016UNR/CSDE1 Drives a Post-transcriptional Program to Promote Melanoma Invasion and Metastasis.39
159283322005UNR translation can be driven by an IRES element that is negatively regulated by polypyrimidine tract binding protein.30
241893442014Common genetic variants on 1p13.2 associate with risk of autism.23
179475292007Internal initiation of translation from the human rhinovirus-2 internal ribosome entry site requires the binding of Unr to two distinct sites on the 5' untranslated region.16
291299162017A post-transcriptional program coordinated by CSDE1 prevents intrinsic neural differentiation of human embryonic stem cells.12
206280862010Variation at the NFATC2 locus increases the risk of thiazolidinedione-induced edema in the Diabetes REduction Assessment with ramipril and rosiglitazone Medication (DREAM) study.11

Citation

Dessen P

CSDE1 (cold shock domain containing E1)

Atlas Genet Cytogenet Oncol Haematol. 2016-01-01

Online version: http://atlasgeneticsoncology.org/gene/55574/csde1