Atlas of Genetics and Cytogenetics in Oncology and Haematology


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CSH2 (chorionic somatomammotropin hormone 2)

Identity

Alias_symbol (synonym)hCS-B
CSB
CS-2
Other aliasPL
HGNC (Hugo) CSH2
LocusID (NCBI) 1443
Atlas_Id 62122
Location 17q23.3  [Link to chromosome band 17q23]
Location_base_pair Starts at 61949372 and ends at 61951089 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
CSH2 (17q23.3) / ORMDL1 (2q32.2)DCP1A (3p21.1) / CSH2 (17q23.3)FN1 (2q35) / CSH2 (17q23.3)
HBA2 (16p13.3) / CSH2 (17q23.3)ISYNA1 (19p13.11) / CSH2 (17q23.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CSH2   2441
Cards
Entrez_Gene (NCBI)CSH2  1443  chorionic somatomammotropin hormone 2
AliasesCS-2; CSB; PL; hCS-B
GeneCards (Weizmann)CSH2
Ensembl hg19 (Hinxton)ENSG00000213218 [Gene_View]  chr17:61949372-61951089 [Contig_View]  CSH2 [Vega]
Ensembl hg38 (Hinxton)ENSG00000213218 [Gene_View]  chr17:61949372-61951089 [Contig_View]  CSH2 [Vega]
ICGC DataPortalENSG00000213218
TCGA cBioPortalCSH2
AceView (NCBI)CSH2
Genatlas (Paris)CSH2
WikiGenes1443
SOURCE (Princeton)CSH2
Genetics Home Reference (NIH)CSH2
Genomic and cartography
GoldenPath hg19 (UCSC)CSH2  -     chr17:61949372-61951089 -  17q23.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)CSH2  -     17q23.3   [Description]    (hg38-Dec_2013)
EnsemblCSH2 - 17q23.3 [CytoView hg19]  CSH2 - 17q23.3 [CytoView hg38]
Mapping of homologs : NCBICSH2 [Mapview hg19]  CSH2 [Mapview hg38]
OMIM118820   
Gene and transcription
Genbank (Entrez)BC022044 BC035965 BC119748 CR615915 DQ892826
RefSeq transcript (Entrez)NM_020991 NM_022644 NM_022645
RefSeq genomic (Entrez)NC_000017 NC_018928 NT_010783 NW_004929407
Consensus coding sequences : CCDS (NCBI)CSH2
Cluster EST : UnigeneHs.654515 [ NCBI ]
CGAP (NCI)Hs.654515
Alternative Splicing GalleryENSG00000213218
Gene ExpressionCSH2 [ NCBI-GEO ]   CSH2 [ EBI - ARRAY_EXPRESS ]   CSH2 [ SEEK ]   CSH2 [ MEM ]
Gene Expression Viewer (FireBrowse)CSH2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)1443
GTEX Portal (Tissue expression)CSH2
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CSH2
DMDM Disease mutations1443
Blocks (Seattle)CSH2
Human Protein AtlasENSG00000213218
HPRD06688
Protein Interaction databases
FunCoupENSG00000213218
BioGRIDCSH2
STRING (EMBL)CSH2
ZODIACCSH2
Ontologies - Pathways
Huge Navigator CSH2 [HugePedia]
snp3D : Map Gene to Disease1443
BioCentury BCIQCSH2
ClinGenCSH2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD1443
Chemical/Pharm GKB GenePA26944
Clinical trialCSH2
Miscellaneous
canSAR (ICR)CSH2 (select the gene name)
Probes
Litterature
PubMed24 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCSH2
EVEXCSH2
GoPubMedCSH2
iHOPCSH2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:00:26 CET 2017

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