Atlas of Genetics and Cytogenetics in Oncology and Haematology


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CSN1S2AP (casein alpha s2-like A, pseudogene)

Identity

Alias_namesCSN1S2A
casein alpha s2-like A
Other alias
HGNC (Hugo) CSN1S2AP
LocusID (NCBI) 286828
Atlas_Id 62127
Location 4q13.3  [Link to chromosome band 4q13]
Location_base_pair Starts at 70067386 and ends at 70085271 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CSN1S2AP   20230
Cards
Entrez_Gene (NCBI)CSN1S2AP  286828  casein alpha s2-like A, pseudogene
AliasesCSN1S2A
GeneCards (Weizmann)CSN1S2AP
Ensembl hg19 (Hinxton)ENSG00000234124 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000234124 [Gene_View]  chr4:70067386-70085271 [Contig_View]  CSN1S2AP [Vega]
ICGC DataPortalENSG00000234124
TCGA cBioPortalCSN1S2AP
AceView (NCBI)CSN1S2AP
Genatlas (Paris)CSN1S2AP
WikiGenes286828
SOURCE (Princeton)CSN1S2AP
Genetics Home Reference (NIH)CSN1S2AP
Genomic and cartography
GoldenPath hg38 (UCSC)CSN1S2AP  -     chr4:70067386-70085271 +  4q13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CSN1S2AP  -     4q13.3   [Description]    (hg19-Feb_2009)
EnsemblCSN1S2AP - 4q13.3 [CytoView hg19]  CSN1S2AP - 4q13.3 [CytoView hg38]
Mapping of homologs : NCBICSN1S2AP [Mapview hg19]  CSN1S2AP [Mapview hg38]
Gene and transcription
Genbank (Entrez)AY154892 BC128170 BC128173 BC141914 BC150502
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CSN1S2AP
Cluster EST : UnigeneHs.631945 [ NCBI ]
CGAP (NCI)Hs.631945
Alternative Splicing GalleryENSG00000234124
Gene ExpressionCSN1S2AP [ NCBI-GEO ]   CSN1S2AP [ EBI - ARRAY_EXPRESS ]   CSN1S2AP [ SEEK ]   CSN1S2AP [ MEM ]
Gene Expression Viewer (FireBrowse)CSN1S2AP [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)286828
GTEX Portal (Tissue expression)CSN1S2AP
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CSN1S2AP
DMDM Disease mutations286828
Blocks (Seattle)CSN1S2AP
Human Protein AtlasENSG00000234124
IPIIPI00216763   IPI00884014   
Protein Interaction databases
FunCoupENSG00000234124
BioGRIDCSN1S2AP
STRING (EMBL)CSN1S2AP
ZODIACCSN1S2AP
Ontologies - Pathways
Huge Navigator CSN1S2AP [HugePedia]
snp3D : Map Gene to Disease286828
BioCentury BCIQCSN1S2AP
ClinGenCSN1S2AP
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD286828
Chemical/Pharm GKB GenePA142672067
Clinical trialCSN1S2AP
Miscellaneous
canSAR (ICR)CSN1S2AP (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCSN1S2AP
EVEXCSN1S2AP
GoPubMedCSN1S2AP
iHOPCSN1S2AP
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:44:40 CEST 2017

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