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CSN1S2BP (casein alpha s2 like B, pseudogene)

Identity

Alias (NCBI)CSN1S2B
HGNC (Hugo) CSN1S2BP
HGNC Previous nameCSN1S2B
HGNC Previous namecasein alpha s2-like B
LocusID (NCBI) 100337616
Atlas_Id 62128
Location 4q13.3  [Link to chromosome band 4q13]
Location_base_pair Starts at 70133604 and ends at 70146704 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CSN1S2BP   20227
Cards
Entrez_Gene (NCBI)CSN1S2BP  100337616  casein alpha s2 like B, pseudogene
AliasesCSN1S2B
GeneCards (Weizmann)CSN1S2BP
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr4:70133604-70146704 [Contig_View]  CSN1S2BP [Vega]
TCGA cBioPortalCSN1S2BP
AceView (NCBI)CSN1S2BP
Genatlas (Paris)CSN1S2BP
WikiGenes100337616
SOURCE (Princeton)CSN1S2BP
Genetics Home Reference (NIH)CSN1S2BP
Genomic and cartography
GoldenPath hg38 (UCSC)CSN1S2BP  -     chr4:70133604-70146704 +  4q13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CSN1S2BP  -     4q13.3   [Description]    (hg19-Feb_2009)
GoldenPathCSN1S2BP - 4q13.3 [CytoView hg19]  CSN1S2BP - 4q13.3 [CytoView hg38]
genome Data Viewer NCBICSN1S2BP [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AW104440
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CSN1S2BP
Gene ExpressionCSN1S2BP [ NCBI-GEO ]   CSN1S2BP [ EBI - ARRAY_EXPRESS ]   CSN1S2BP [ SEEK ]   CSN1S2BP [ MEM ]
Gene Expression Viewer (FireBrowse)CSN1S2BP [ Firebrowse - Broad ]
GenevisibleExpression of CSN1S2BP in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100337616
GTEX Portal (Tissue expression)CSN1S2BP
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CSN1S2BP
DMDM Disease mutations100337616
Blocks (Seattle)CSN1S2BP
Protein Interaction databases
BioGRIDCSN1S2BP
STRING (EMBL)CSN1S2BP
ZODIACCSN1S2BP
Ontologies - Pathways
Huge Navigator CSN1S2BP [HugePedia]
snp3D : Map Gene to Disease100337616
BioCentury BCIQCSN1S2BP
ClinGenCSN1S2BP
Clinical trials, drugs, therapy
Protein Interactions : CTD100337616
Clinical trialCSN1S2BP
Miscellaneous
canSAR (ICR)CSN1S2BP (select the gene name)
HarmonizomeCSN1S2BP
DataMed IndexCSN1S2BP
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCSN1S2BP
EVEXCSN1S2BP
GoPubMedCSN1S2BP
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Sat Aug 22 19:09:15 CEST 2020

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