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CSNK1A1L (casein kinase 1 alpha 1 like)

Identity

Alias_namescasein kinase 1, alpha 1-like
Alias_symbol (synonym)MGC33182
Other aliasCK1
HGNC (Hugo) CSNK1A1L
LocusID (NCBI) 122011
Atlas_Id 62130
Location 13q13.3  [Link to chromosome band 13q13]
Location_base_pair Starts at 37103260 and ends at 37105664 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CSNK1A1L   20289
Cards
Entrez_Gene (NCBI)CSNK1A1L  122011  casein kinase 1 alpha 1 like
AliasesCK1
GeneCards (Weizmann)CSNK1A1L
Ensembl hg19 (Hinxton)ENSG00000180138 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000180138 [Gene_View]  chr13:37103260-37105664 [Contig_View]  CSNK1A1L [Vega]
ICGC DataPortalENSG00000180138
TCGA cBioPortalCSNK1A1L
AceView (NCBI)CSNK1A1L
Genatlas (Paris)CSNK1A1L
WikiGenes122011
SOURCE (Princeton)CSNK1A1L
Genetics Home Reference (NIH)CSNK1A1L
Genomic and cartography
GoldenPath hg38 (UCSC)CSNK1A1L  -     chr13:37103260-37105664 -  13q13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CSNK1A1L  -     13q13.3   [Description]    (hg19-Feb_2009)
EnsemblCSNK1A1L - 13q13.3 [CytoView hg19]  CSNK1A1L - 13q13.3 [CytoView hg38]
Mapping of homologs : NCBICSNK1A1L [Mapview hg19]  CSNK1A1L [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC028723 DQ891231 DQ894415
RefSeq transcript (Entrez)NM_145203
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CSNK1A1L
Cluster EST : UnigeneHs.512897 [ NCBI ]
CGAP (NCI)Hs.512897
Alternative Splicing GalleryENSG00000180138
Gene ExpressionCSNK1A1L [ NCBI-GEO ]   CSNK1A1L [ EBI - ARRAY_EXPRESS ]   CSNK1A1L [ SEEK ]   CSNK1A1L [ MEM ]
Gene Expression Viewer (FireBrowse)CSNK1A1L [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)122011
GTEX Portal (Tissue expression)CSNK1A1L
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N752   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N752  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N752
Splice isoforms : SwissVarQ8N752
Catalytic activity : Enzyme2.7.11.1 [ Enzyme-Expasy ]   2.7.11.12.7.11.1 [ IntEnz-EBI ]   2.7.11.1 [ BRENDA ]   2.7.11.1 [ KEGG ]   
PhosPhoSitePlusQ8N752
Domaine pattern : Prosite (Expaxy)PROTEIN_KINASE_ATP (PS00107)    PROTEIN_KINASE_DOM (PS50011)    PROTEIN_KINASE_ST (PS00108)   
Domains : Interpro (EBI)Kinase-like_dom    Prot_kinase_dom    Protein_kinase_ATP_BS    Ser/Thr_kinase_AS   
Domain families : Pfam (Sanger)Pkinase (PF00069)   
Domain families : Pfam (NCBI)pfam00069   
Domain families : Smart (EMBL)S_TKc (SM00220)  
Conserved Domain (NCBI)CSNK1A1L
DMDM Disease mutations122011
Blocks (Seattle)CSNK1A1L
SuperfamilyQ8N752
Human Protein AtlasENSG00000180138
Peptide AtlasQ8N752
HPRD13095
IPIIPI00167096   
Protein Interaction databases
DIP (DOE-UCLA)Q8N752
IntAct (EBI)Q8N752
FunCoupENSG00000180138
BioGRIDCSNK1A1L
STRING (EMBL)CSNK1A1L
ZODIACCSNK1A1L
Ontologies - Pathways
QuickGOQ8N752
Ontology : AmiGOcell morphogenesis  protein serine/threonine kinase activity  ATP binding  nucleus  cytoplasm  cytosol  phagocytosis  regulation of cell shape  Wnt signaling pathway  peptidyl-serine phosphorylation  intracellular ribonucleoprotein complex  
Ontology : EGO-EBIcell morphogenesis  protein serine/threonine kinase activity  ATP binding  nucleus  cytoplasm  cytosol  phagocytosis  regulation of cell shape  Wnt signaling pathway  peptidyl-serine phosphorylation  intracellular ribonucleoprotein complex  
Pathways : KEGGWnt signaling pathway    Hedgehog signaling pathway   
NDEx NetworkCSNK1A1L
Atlas of Cancer Signalling NetworkCSNK1A1L
Wikipedia pathwaysCSNK1A1L
Orthology - Evolution
OrthoDB122011
GeneTree (enSembl)ENSG00000180138
Phylogenetic Trees/Animal Genes : TreeFamCSNK1A1L
HOVERGENQ8N752
HOGENOMQ8N752
Homologs : HomoloGeneCSNK1A1L
Homology/Alignments : Family Browser (UCSC)CSNK1A1L
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCSNK1A1L [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CSNK1A1L
dbVarCSNK1A1L
ClinVarCSNK1A1L
1000_GenomesCSNK1A1L 
Exome Variant ServerCSNK1A1L
ExAC (Exome Aggregation Consortium)CSNK1A1L (select the gene name)
Genetic variants : HAPMAP122011
Genomic Variants (DGV)CSNK1A1L [DGVbeta]
DECIPHERCSNK1A1L [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCSNK1A1L 
Mutations
ICGC Data PortalCSNK1A1L 
TCGA Data PortalCSNK1A1L 
Broad Tumor PortalCSNK1A1L
OASIS PortalCSNK1A1L [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCSNK1A1L  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDCSNK1A1L
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch CSNK1A1L
DgiDB (Drug Gene Interaction Database)CSNK1A1L
DoCM (Curated mutations)CSNK1A1L (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CSNK1A1L (select a term)
intoGenCSNK1A1L
Cancer3DCSNK1A1L(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenCSNK1A1L
Genetic Testing Registry CSNK1A1L
NextProtQ8N752 [Medical]
TSGene122011
GENETestsCSNK1A1L
Target ValidationCSNK1A1L
Huge Navigator CSNK1A1L [HugePedia]
snp3D : Map Gene to Disease122011
BioCentury BCIQCSNK1A1L
ClinGenCSNK1A1L
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD122011
Chemical/Pharm GKB GenePA134917108
Clinical trialCSNK1A1L
Miscellaneous
canSAR (ICR)CSNK1A1L (select the gene name)
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCSNK1A1L
EVEXCSNK1A1L
GoPubMedCSNK1A1L
iHOPCSNK1A1L
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:44:41 CEST 2017

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