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CSNK1G2 (casein kinase 1 gamma 2)

Identity

Alias (NCBI)CK1g2
HGNC (Hugo) CSNK1G2
HGNC Alias symbCK1g2
HGNC Previous namecasein kinase 1, gamma 2
LocusID (NCBI) 1455
Atlas_Id 43219
Location 19p13.3  [Link to chromosome band 19p13]
Location_base_pair Starts at 1941172 and ends at 1981337 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
CSNK1G2 (19p13.3) / CSNK1G2 (19p13.3)CSNK1G2 (19p13.3) / NBPF11 (1q21.1)CSNK1G2 (19p13.3) / SCAMP4 (19p13.3)
DOT1L (19p13.3) / CSNK1G2 (19p13.3)MAST2 (1p34.1) / CSNK1G2 (19p13.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)CSNK1G2   2455
Cards
Entrez_Gene (NCBI)CSNK1G2    casein kinase 1 gamma 2
AliasesCK1g2
GeneCards (Weizmann)CSNK1G2
Ensembl hg19 (Hinxton)ENSG00000133275 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000133275 [Gene_View]  ENSG00000133275 [Sequence]  chr19:1941172-1981337 [Contig_View]  CSNK1G2 [Vega]
ICGC DataPortalENSG00000133275
TCGA cBioPortalCSNK1G2
AceView (NCBI)CSNK1G2
Genatlas (Paris)CSNK1G2
SOURCE (Princeton)CSNK1G2
Genetics Home Reference (NIH)CSNK1G2
Genomic and cartography
GoldenPath hg38 (UCSC)CSNK1G2  -     chr19:1941172-1981337 +  19p13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CSNK1G2  -     19p13.3   [Description]    (hg19-Feb_2009)
GoldenPathCSNK1G2 - 19p13.3 [CytoView hg19]  CSNK1G2 - 19p13.3 [CytoView hg38]
ImmunoBaseENSG00000133275
Genome Data Viewer NCBICSNK1G2 [Mapview hg19]  
OMIM602214   
Gene and transcription
Genbank (Entrez)AB451278 AB451410 AF001177 AY007134 BC018693
RefSeq transcript (Entrez)NM_001319
Consensus coding sequences : CCDS (NCBI)CSNK1G2
Gene ExpressionCSNK1G2 [ NCBI-GEO ]   CSNK1G2 [ EBI - ARRAY_EXPRESS ]   CSNK1G2 [ SEEK ]   CSNK1G2 [ MEM ]
Gene Expression Viewer (FireBrowse)CSNK1G2 [ Firebrowse - Broad ]
GenevisibleExpression of CSNK1G2 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)1455
GTEX Portal (Tissue expression)CSNK1G2
Human Protein AtlasENSG00000133275-CSNK1G2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP78368   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP78368  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP78368
PhosPhoSitePlusP78368
Domaine pattern : Prosite (Expaxy)PROTEIN_KINASE_ATP (PS00107)    PROTEIN_KINASE_DOM (PS50011)    PROTEIN_KINASE_ST (PS00108)   
Domains : Interpro (EBI)Casein_kinase-1_gamma_C    Kinase-like_dom_sf    Prot_kinase_dom    Protein_kinase_ATP_BS    Ser/Thr_kinase_AS   
Domain families : Pfam (Sanger)CK1gamma_C (PF12605)    Pkinase (PF00069)   
Domain families : Pfam (NCBI)pfam12605    pfam00069   
Domain families : Smart (EMBL)S_TKc (SM00220)  
Conserved Domain (NCBI)CSNK1G2
PDB (RSDB)2C47   
PDB Europe2C47   
PDB (PDBSum)2C47   
PDB (IMB)2C47   
Structural Biology KnowledgeBase2C47   
SCOP (Structural Classification of Proteins)2C47   
CATH (Classification of proteins structures)2C47   
SuperfamilyP78368
AlphaFold pdb e-kbP78368   
Human Protein Atlas [tissue]ENSG00000133275-CSNK1G2 [tissue]
HPRD03738
Protein Interaction databases
DIP (DOE-UCLA)P78368
IntAct (EBI)P78368
BioGRIDCSNK1G2
STRING (EMBL)CSNK1G2
ZODIACCSNK1G2
Ontologies - Pathways
QuickGOP78368
Ontology : AmiGOprotein serine/threonine kinase activity  protein serine/threonine kinase activity  protein serine/threonine kinase activity  protein binding  ATP binding  nucleus  cytoplasm  cytosol  plasma membrane  cell cortex  protein phosphorylation  endocytosis  signal transduction  membrane  Wnt signaling pathway  peptidyl-serine phosphorylation  peptidyl-serine phosphorylation  sphingolipid biosynthetic process  protein autophosphorylation  positive regulation of canonical Wnt signaling pathway  protein serine kinase activity  protein threonine kinase activity  
Ontology : EGO-EBIprotein serine/threonine kinase activity  protein serine/threonine kinase activity  protein serine/threonine kinase activity  protein binding  ATP binding  nucleus  cytoplasm  cytosol  plasma membrane  cell cortex  protein phosphorylation  endocytosis  signal transduction  membrane  Wnt signaling pathway  peptidyl-serine phosphorylation  peptidyl-serine phosphorylation  sphingolipid biosynthetic process  protein autophosphorylation  positive regulation of canonical Wnt signaling pathway  protein serine kinase activity  protein threonine kinase activity  
Pathways : KEGGHedgehog signaling pathway   
NDEx NetworkCSNK1G2
Atlas of Cancer Signalling NetworkCSNK1G2
Wikipedia pathwaysCSNK1G2
Orthology - Evolution
OrthoDB1455
GeneTree (enSembl)ENSG00000133275
Phylogenetic Trees/Animal Genes : TreeFamCSNK1G2
Homologs : HomoloGeneCSNK1G2
Homology/Alignments : Family Browser (UCSC)CSNK1G2
Gene fusions - Rearrangements
Fusion : MitelmanDOT1L/CSNK1G2 [19p13.3/19p13.3]  
Fusion : QuiverCSNK1G2
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCSNK1G2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CSNK1G2
dbVarCSNK1G2
ClinVarCSNK1G2
MonarchCSNK1G2
1000_GenomesCSNK1G2 
Exome Variant ServerCSNK1G2
GNOMAD BrowserENSG00000133275
Varsome BrowserCSNK1G2
ACMGCSNK1G2 variants
VarityP78368
Genomic Variants (DGV)CSNK1G2 [DGVbeta]
DECIPHERCSNK1G2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCSNK1G2 
Mutations
ICGC Data PortalCSNK1G2 
TCGA Data PortalCSNK1G2 
Broad Tumor PortalCSNK1G2
OASIS PortalCSNK1G2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCSNK1G2  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DCSNK1G2
Mutations and Diseases : HGMDCSNK1G2
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaCSNK1G2
DgiDB (Drug Gene Interaction Database)CSNK1G2
DoCM (Curated mutations)CSNK1G2
CIViC (Clinical Interpretations of Variants in Cancer)CSNK1G2
Cancer3DCSNK1G2
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM602214   
Orphanet
DisGeNETCSNK1G2
MedgenCSNK1G2
Genetic Testing Registry CSNK1G2
NextProtP78368 [Medical]
GENETestsCSNK1G2
Target ValidationCSNK1G2
Huge Navigator CSNK1G2 [HugePedia]
ClinGenCSNK1G2
Clinical trials, drugs, therapy
MyCancerGenomeCSNK1G2
Protein Interactions : CTDCSNK1G2
Pharm GKB GenePA26955
PharosP78368
Clinical trialCSNK1G2
Miscellaneous
canSAR (ICR)CSNK1G2
HarmonizomeCSNK1G2
DataMed IndexCSNK1G2
Probes
Litterature
PubMed38 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXCSNK1G2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:05:23 CEST 2021

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