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CSNK2A2 (casein kinase 2, alpha prime polypeptide)

Identity

Other namesCK2A2
CSNK2A1
HGNC (Hugo) CSNK2A2
LocusID (NCBI) 1459
Location 16q21
Location_base_pair Starts at 58191812 and ends at 58231782 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)CSNK2A2   2459
Entrez_Gene (NCBI)CSNK2A2  1459  casein kinase 2, alpha prime polypeptide
Cards
GeneCards (Weizmann)CSNK2A2
Ensembl (Hinxton)ENSG00000070770 [Gene_View]  chr16:58191812-58231782 [Contig_View]  CSNK2A2 [Vega]
AceView (NCBI)CSNK2A2
Genatlas (Paris)CSNK2A2
SOURCE (Stanford)NM_001896
Genomic and cartography
GoldenPath (UCSC)CSNK2A2  -  16q21   chr16:58191812-58231782 -  16q21   [Description]    (hg19-Feb_2009)
EnsemblCSNK2A2 - 16q21 [CytoView]
Mapping of homologs : NCBICSNK2A2 [Mapview]
OMIM115442   
Gene and transcription
Genbank (Entrez)AI150700 AK090752 AK125922 BC008812 DQ893025
RefSeq transcript (SRS)NM_001896
RefSeq transcript (Entrez)NM_001896
RefSeq genomic (SRS)AC_000148 NC_000016 NC_018927 NT_010498 NW_001838290 NW_004078087
RefSeq genomic (Entrez)AC_000148 NC_000016 NC_018927 NT_010498 NW_001838290 NW_004078087
Consensus coding sequences : CCDS (NCBI)CSNK2A2
Cluster EST : UnigeneHs.82201 [ SRS ] Hs.82201 [ NCBI ]
CGAP (NCI)Hs.82201
Alternative Splicing : Fast-db (Paris)GSHG0011878
Alternative Splicing GalleryENSG00000070770
Gene ExpressionCSNK2A2 [ NCBI-GEO ]   CSNK2A2 [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP19784 (SRS) P19784 (Uniprot)
NextProtP19784
With graphics : InterProP19784
Splice isoforms : SwissVarP19784(Swissvar)
Domaine pattern : Prosite (SRS)PROTEIN_KINASE_ATP (PS00107)    PROTEIN_KINASE_DOM (PS50011)    PROTEIN_KINASE_ST (PS00108)   
Domaine pattern : Prosite (Expaxy)PROTEIN_KINASE_ATP (PS00107)    PROTEIN_KINASE_DOM (PS50011)    PROTEIN_KINASE_ST (PS00108)   
Domains : Interpro (SRS)Kinase-like_dom    Prot_kinase_cat_dom    Protein_kinase_ATP_BS    Ser/Thr_dual-sp_kinase_dom    Ser/Thr_kinase_AS   
Domains : Interpro (EBI)Kinase-like_dom    Prot_kinase_cat_dom    Protein_kinase_ATP_BS    Ser/Thr_dual-sp_kinase_dom    Ser/Thr_kinase_AS   
Related proteins : CluSTrP19784
Domain families : Pfam (SRS)Pkinase (PF00069)   
Domain families : Pfam (Sanger)Pkinase (PF00069)   
Domain families : Pfam (NCBI)pfam00069   
Domain families : Smart (EMBL)S_TKc (SM00220)  
DMDM1459
Blocks (Seattle)P19784
PDB (SRS)3E3B    3OFM    3U87   
PDB (PDBSum)3E3B    3OFM    3U87   
PDB (IMB)3E3B    3OFM    3U87   
PDB (RSDB)3E3B    3OFM    3U87   
Human Protein AtlasENSG00000070770
HPRD00279
IPIIPI00020602   
Protein Interaction databases
DIP (DOE-UCLA)P19784
IntAct (EBI)P19784
FunCoupENSG00000070770
REACTOMECSNK2A2
Protein Interaction Database1459
BioGRIDCSNK2A2
InParanoidP19784
Interologous Interaction database P19784
IntegromeDBCSNK2A2
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)CSNK2A2
SNP (GeneSNP Utah)CSNK2A2
SNP : HGBaseCSNK2A2
Genetic variants : HAPMAPCSNK2A2
Somatic Mutations in Cancer : COSMICCSNK2A2 
CONAN: Copy Number AnalysisCSNK2A2 
Mutations and Diseases : HGMDCSNK2A2
OMIM115442   
GENETests115442   
Disease Genetic AssociationCSNK2A2
Huge Navigator CSNK2A2 [HugePedia]  CSNK2A2 [HugeCancerGEM]
Genomic VariantsCSNK2A2  CSNK2A2 [DGVbeta]
snp3D : Map Gene to Disease1459
General knowledge
Homologs : HomoloGeneCSNK2A2
Homology/Alignments : Family Browser (UCSC)CSNK2A2
Phylogenetic Trees/Animal Genes : TreeFamCSNK2A2
Chemical/Protein Interactions : CTD1459
Chemical/Pharm GKB GenePA26959
Clinical trialCSNK2A2
Cancer Resource (Charite)ENSG00000070770
Ontology : AmiGOprotein serine/threonine kinase activity  protein binding  ATP binding  nucleus  cytosol  transcription, DNA-dependent  regulation of transcription, DNA-dependent  apoptotic process  axon guidance  Wnt receptor signaling pathway  PcG protein complex  protein N-terminus binding  mitotic cell cycle spindle checkpoint  
Ontology : EGO-EBIprotein serine/threonine kinase activity  protein binding  ATP binding  nucleus  cytosol  transcription, DNA-dependent  regulation of transcription, DNA-dependent  apoptotic process  axon guidance  Wnt receptor signaling pathway  PcG protein complex  protein N-terminus binding  mitotic cell cycle spindle checkpoint  
Pathways : KEGGWnt signaling pathwayAdherens junctionTight junction
Other databases
Probes
Litterature
PubMed172 Pubmed reference(s) in Entrez
PubGeneCSNK2A2
iHOPCSNK2A2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 1 12:22:35 CEST 2013
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