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CSNK2A2 (casein kinase 2, alpha prime polypeptide)

Identity

Other namesCK2A2
CSNK2A1
HGNC (Hugo) CSNK2A2
LocusID (NCBI) 1459
Location 16q21
Location_base_pair Starts at 58191812 and ends at 58231782 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)CSNK2A2   2459
Cards
Entrez_Gene (NCBI)CSNK2A2  1459  casein kinase 2, alpha prime polypeptide
GeneCards (Weizmann)CSNK2A2
Ensembl (Hinxton)ENSG00000070770 [Gene_View]  chr16:58191812-58231782 [Contig_View]  CSNK2A2 [Vega]
ICGC DataPortalENSG00000070770
cBioPortalCSNK2A2
AceView (NCBI)CSNK2A2
Genatlas (Paris)CSNK2A2
WikiGenes1459
SOURCE (Princeton)NM_001896
Genomic and cartography
GoldenPath (UCSC)CSNK2A2  -  16q21   chr16:58191812-58231782 -  16q21   [Description]    (hg19-Feb_2009)
EnsemblCSNK2A2 - 16q21 [CytoView]
Mapping of homologs : NCBICSNK2A2 [Mapview]
OMIM115442   
Gene and transcription
Genbank (Entrez)AI150700 AK090752 AK125922 BC008812 DQ893025
RefSeq transcript (Entrez)NM_001896
RefSeq genomic (Entrez)AC_000148 NC_000016 NC_018927 NT_010498 NW_001838290 NW_004929402
Consensus coding sequences : CCDS (NCBI)CSNK2A2
Cluster EST : UnigeneHs.82201 [ NCBI ]
CGAP (NCI)Hs.82201
Alternative Splicing : Fast-db (Paris)GSHG0011878
Alternative Splicing GalleryENSG00000070770
Gene ExpressionCSNK2A2 [ NCBI-GEO ]     CSNK2A2 [ SEEK ]   CSNK2A2 [ MEM ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP19784 (Uniprot)
NextProtP19784  [Medical]
With graphics : InterProP19784
Splice isoforms : SwissVarP19784 (Swissvar)
Domaine pattern : Prosite (Expaxy)PROTEIN_KINASE_ATP (PS00107)    PROTEIN_KINASE_DOM (PS50011)    PROTEIN_KINASE_ST (PS00108)   
Domains : Interpro (EBI)Kinase-like_dom [organisation]   Prot_kinase_dom [organisation]   Protein_kinase_ATP_BS [organisation]   Ser/Thr_dual-sp_kinase_dom [organisation]   Ser/Thr_kinase_AS [organisation]  
Related proteins : CluSTrP19784
Domain families : Pfam (Sanger)Pkinase (PF00069)   
Domain families : Pfam (NCBI)pfam00069   
Domain families : Smart (EMBL)S_TKc (SM00220)  
DMDM Disease mutations1459
Blocks (Seattle)P19784
PDB (SRS)3E3B    3OFM    3U87   
PDB (PDBSum)3E3B    3OFM    3U87   
PDB (IMB)3E3B    3OFM    3U87   
PDB (RSDB)3E3B    3OFM    3U87   
Human Protein AtlasENSG00000070770 [gene] [tissue] [antibody] [cell] [cancer]
Peptide AtlasP19784
HPRD00279
IPIIPI00020602   
Protein Interaction databases
DIP (DOE-UCLA)P19784
IntAct (EBI)P19784
FunCoupENSG00000070770
BioGRIDCSNK2A2
InParanoidP19784
Interologous Interaction database P19784
IntegromeDBCSNK2A2
STRING (EMBL)CSNK2A2
Ontologies - Pathways
Ontology : AmiGOmitotic cell cycle  protein serine/threonine kinase activity  protein binding  ATP binding  nucleus  cytosol  transcription, DNA-templated  regulation of transcription, DNA-templated  protein phosphorylation  apoptotic process  axon guidance  Wnt signaling pathway  PcG protein complex  protein N-terminus binding  mitotic spindle checkpoint  
Ontology : EGO-EBImitotic cell cycle  protein serine/threonine kinase activity  protein binding  ATP binding  nucleus  cytosol  transcription, DNA-templated  regulation of transcription, DNA-templated  protein phosphorylation  apoptotic process  axon guidance  Wnt signaling pathway  PcG protein complex  protein N-terminus binding  mitotic spindle checkpoint  
Pathways : KEGGRibosome biogenesis in eukaryotes    NF-kappa B signaling pathway    Wnt signaling pathway    Adherens junction    Tight junction    Measles    Herpes simplex infection    Epstein-Barr virus infection   
Protein Interaction DatabaseCSNK2A2
Wikipedia pathwaysCSNK2A2
Gene fusion - rearrangments
Polymorphisms : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)CSNK2A2
snp3D : Map Gene to Disease1459
SNP (GeneSNP Utah)CSNK2A2
SNP : HGBaseCSNK2A2
Genetic variants : HAPMAPCSNK2A2
Exome VariantCSNK2A2
1000_GenomesCSNK2A2 
ICGC programENSG00000070770 
Somatic Mutations in Cancer : COSMICCSNK2A2 
CONAN: Copy Number AnalysisCSNK2A2 
Mutations and Diseases : HGMDCSNK2A2
Genomic VariantsCSNK2A2  CSNK2A2 [DGVbeta]
dbVarCSNK2A2
ClinVarCSNK2A2
Pred. of missensesPolyPhen-2  SIFT(SG)  SIFT(JCVI)  Align-GVGD  MutAssessor  Mutanalyser  
Pred. splicesGeneSplicer  Human Splicing Finder  MaxEntScan  
Diseases
OMIM115442   
MedgenCSNK2A2
GENETestsCSNK2A2
Disease Genetic AssociationCSNK2A2
Huge Navigator CSNK2A2 [HugePedia]  CSNK2A2 [HugeCancerGEM]
General knowledge
Homologs : HomoloGeneCSNK2A2
Homology/Alignments : Family Browser (UCSC)CSNK2A2
Phylogenetic Trees/Animal Genes : TreeFamCSNK2A2
Chemical/Protein Interactions : CTD1459
Chemical/Pharm GKB GenePA26959
Clinical trialCSNK2A2
Cancer Resource (Charite)ENSG00000070770
Other databases
Probes
Litterature
PubMed185 Pubmed reference(s) in Entrez
CoreMineCSNK2A2
iHOPCSNK2A2
OncoSearchCSNK2A2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated12-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Jul 26 14:28:35 CEST 2014

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