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CSRP2BP (CSRP2 binding protein)

Identity

Other aliasATAC2
CRP2BP
KAT14
PRO1194
dJ717M23.1
HGNC (Hugo) CSRP2BP
LocusID (NCBI) 57325
Atlas_Id 62140
Location 20p11.23  [Link to chromosome band 20p11]
Location_base_pair Starts at 18122868 and ends at 18169031 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CSRP2BP   15904
Cards
Entrez_Gene (NCBI)CSRP2BP  57325  CSRP2 binding protein
AliasesATAC2; CRP2BP; KAT14; PRO1194; 
dJ717M23.1
GeneCards (Weizmann)CSRP2BP
Ensembl hg19 (Hinxton)ENSG00000149474 [Gene_View]  chr20:18122868-18169031 [Contig_View]  CSRP2BP [Vega]
Ensembl hg38 (Hinxton)ENSG00000149474 [Gene_View]  chr20:18122868-18169031 [Contig_View]  CSRP2BP [Vega]
ICGC DataPortalENSG00000149474
TCGA cBioPortalCSRP2BP
AceView (NCBI)CSRP2BP
Genatlas (Paris)CSRP2BP
WikiGenes57325
SOURCE (Princeton)CSRP2BP
Genetics Home Reference (NIH)CSRP2BP
Genomic and cartography
GoldenPath hg19 (UCSC)CSRP2BP  -     chr20:18122868-18169031 +  20p11.23   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)CSRP2BP  -     20p11.23   [Description]    (hg38-Dec_2013)
EnsemblCSRP2BP - 20p11.23 [CytoView hg19]  CSRP2BP - 20p11.23 [CytoView hg38]
Mapping of homologs : NCBICSRP2BP [Mapview hg19]  CSRP2BP [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF086492 AF252257 AI199208 AK023634 AK023759
RefSeq transcript (Entrez)NM_020536 NM_177926
RefSeq genomic (Entrez)NC_000020 NC_018931 NT_011387 NW_004929416
Consensus coding sequences : CCDS (NCBI)CSRP2BP
Cluster EST : UnigeneHs.728790 [ NCBI ]
CGAP (NCI)Hs.728790
Alternative Splicing GalleryENSG00000149474
Gene ExpressionCSRP2BP [ NCBI-GEO ]   CSRP2BP [ EBI - ARRAY_EXPRESS ]   CSRP2BP [ SEEK ]   CSRP2BP [ MEM ]
Gene Expression Viewer (FireBrowse)CSRP2BP [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)57325
GTEX Portal (Tissue expression)CSRP2BP
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9H8E8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9H8E8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9H8E8
Splice isoforms : SwissVarQ9H8E8
PhosPhoSitePlusQ9H8E8
Domaine pattern : Prosite (Expaxy)GNAT (PS51186)   
Domains : Interpro (EBI)Acyl_CoA_acyltransferase    GNAT_dom   
Domain families : Pfam (Sanger)Acetyltransf_1 (PF00583)   
Domain families : Pfam (NCBI)pfam00583   
Conserved Domain (NCBI)CSRP2BP
DMDM Disease mutations57325
Blocks (Seattle)CSRP2BP
SuperfamilyQ9H8E8
Human Protein AtlasENSG00000149474
Peptide AtlasQ9H8E8
HPRD16765
IPIIPI00063635   IPI00218147   IPI00796669   IPI00965806   
Protein Interaction databases
DIP (DOE-UCLA)Q9H8E8
IntAct (EBI)Q9H8E8
FunCoupENSG00000149474
BioGRIDCSRP2BP
STRING (EMBL)CSRP2BP
ZODIACCSRP2BP
Ontologies - Pathways
QuickGOQ9H8E8
Ontology : AmiGOG2/M transition of mitotic cell cycle  histone acetyltransferase activity  protein binding  nucleus  Ada2/Gcn5/Ada3 transcription activator complex  cytoplasm  chromatin organization  LIM domain binding  histone H3 acetylation  
Ontology : EGO-EBIG2/M transition of mitotic cell cycle  histone acetyltransferase activity  protein binding  nucleus  Ada2/Gcn5/Ada3 transcription activator complex  cytoplasm  chromatin organization  LIM domain binding  histone H3 acetylation  
NDEx NetworkCSRP2BP
Atlas of Cancer Signalling NetworkCSRP2BP
Wikipedia pathwaysCSRP2BP
Orthology - Evolution
OrthoDB57325
GeneTree (enSembl)ENSG00000149474
Phylogenetic Trees/Animal Genes : TreeFamCSRP2BP
HOVERGENQ9H8E8
HOGENOMQ9H8E8
Homologs : HomoloGeneCSRP2BP
Homology/Alignments : Family Browser (UCSC)CSRP2BP
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCSRP2BP [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CSRP2BP
dbVarCSRP2BP
ClinVarCSRP2BP
1000_GenomesCSRP2BP 
Exome Variant ServerCSRP2BP
ExAC (Exome Aggregation Consortium)CSRP2BP (select the gene name)
Genetic variants : HAPMAP57325
Genomic Variants (DGV)CSRP2BP [DGVbeta]
DECIPHER (Syndromes)20:18122868-18169031  ENSG00000149474
CONAN: Copy Number AnalysisCSRP2BP 
Mutations
ICGC Data PortalCSRP2BP 
TCGA Data PortalCSRP2BP 
Broad Tumor PortalCSRP2BP
OASIS PortalCSRP2BP [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCSRP2BP  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDCSRP2BP
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch CSRP2BP
DgiDB (Drug Gene Interaction Database)CSRP2BP
DoCM (Curated mutations)CSRP2BP (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CSRP2BP (select a term)
intoGenCSRP2BP
Cancer3DCSRP2BP(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenCSRP2BP
Genetic Testing Registry CSRP2BP
NextProtQ9H8E8 [Medical]
TSGene57325
GENETestsCSRP2BP
Huge Navigator CSRP2BP [HugePedia]
snp3D : Map Gene to Disease57325
BioCentury BCIQCSRP2BP
ClinGenCSRP2BP
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD57325
Chemical/Pharm GKB GenePA26969
Clinical trialCSRP2BP
Miscellaneous
canSAR (ICR)CSRP2BP (select the gene name)
Probes
Litterature
PubMed17 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCSRP2BP
EVEXCSRP2BP
GoPubMedCSRP2BP
iHOPCSRP2BP
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:00:31 CET 2017

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