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CST8 (cystatin 8 (cystatin-related epididymal specific))

Identity

Alias_namescystatin 8 (cystatin-related epididymal specific)
Alias_symbol (synonym)CRES
CTES5
Other alias
HGNC (Hugo) CST8
LocusID (NCBI) 10047
Atlas_Id 62145
Location 20p11.21  [Link to chromosome band 20p11]
Location_base_pair Starts at 23471738 and ends at 23476655 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CST8   2480
Cards
Entrez_Gene (NCBI)CST8  10047  cystatin 8 (cystatin-related epididymal specific)
AliasesCRES; CTES5
GeneCards (Weizmann)CST8
Ensembl hg19 (Hinxton)ENSG00000125815 [Gene_View]  chr20:23471738-23476655 [Contig_View]  CST8 [Vega]
Ensembl hg38 (Hinxton)ENSG00000125815 [Gene_View]  chr20:23471738-23476655 [Contig_View]  CST8 [Vega]
ICGC DataPortalENSG00000125815
TCGA cBioPortalCST8
AceView (NCBI)CST8
Genatlas (Paris)CST8
WikiGenes10047
SOURCE (Princeton)CST8
Genetics Home Reference (NIH)CST8
Genomic and cartography
GoldenPath hg19 (UCSC)CST8  -     chr20:23471738-23476655 +  20p11.21   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)CST8  -     20p11.21   [Description]    (hg38-Dec_2013)
EnsemblCST8 - 20p11.21 [CytoView hg19]  CST8 - 20p11.21 [CytoView hg38]
Mapping of homologs : NCBICST8 [Mapview hg19]  CST8 [Mapview hg38]
OMIM608683   
Gene and transcription
Genbank (Entrez)AA436982 AF059244 AW665128 BC069496 BC069536
RefSeq transcript (Entrez)NM_001281730 NM_005492
RefSeq genomic (Entrez)NC_000020 NC_018931 NT_011387 NW_004929416
Consensus coding sequences : CCDS (NCBI)CST8
Cluster EST : UnigeneHs.121602 [ NCBI ]
CGAP (NCI)Hs.121602
Alternative Splicing GalleryENSG00000125815
Gene ExpressionCST8 [ NCBI-GEO ]   CST8 [ EBI - ARRAY_EXPRESS ]   CST8 [ SEEK ]   CST8 [ MEM ]
Gene Expression Viewer (FireBrowse)CST8 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)10047
GTEX Portal (Tissue expression)CST8
Protein : pattern, domain, 3D structure
UniProt/SwissProtO60676   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO60676  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO60676
Splice isoforms : SwissVarO60676
PhosPhoSitePlusO60676
Domains : Interpro (EBI)Cystatin    Prot_inh_cystat   
Domain families : Pfam (Sanger)Cystatin (PF00031)   
Domain families : Pfam (NCBI)pfam00031   
Domain families : Smart (EMBL)CY (SM00043)  
Conserved Domain (NCBI)CST8
DMDM Disease mutations10047
Blocks (Seattle)CST8
SuperfamilyO60676
Human Protein AtlasENSG00000125815
Peptide AtlasO60676
HPRD16366
IPIIPI00031019   IPI00795502   
Protein Interaction databases
DIP (DOE-UCLA)O60676
IntAct (EBI)O60676
FunCoupENSG00000125815
BioGRIDCST8
STRING (EMBL)CST8
ZODIACCST8
Ontologies - Pathways
QuickGOO60676
Ontology : AmiGOcysteine-type endopeptidase inhibitor activity  extracellular region  cytoplasm  cell surface  negative regulation of endopeptidase activity  negative regulation of endopeptidase activity  
Ontology : EGO-EBIcysteine-type endopeptidase inhibitor activity  extracellular region  cytoplasm  cell surface  negative regulation of endopeptidase activity  negative regulation of endopeptidase activity  
NDEx NetworkCST8
Atlas of Cancer Signalling NetworkCST8
Wikipedia pathwaysCST8
Orthology - Evolution
OrthoDB10047
GeneTree (enSembl)ENSG00000125815
Phylogenetic Trees/Animal Genes : TreeFamCST8
HOVERGENO60676
HOGENOMO60676
Homologs : HomoloGeneCST8
Homology/Alignments : Family Browser (UCSC)CST8
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCST8 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CST8
dbVarCST8
ClinVarCST8
1000_GenomesCST8 
Exome Variant ServerCST8
ExAC (Exome Aggregation Consortium)CST8 (select the gene name)
Genetic variants : HAPMAP10047
Genomic Variants (DGV)CST8 [DGVbeta]
DECIPHER (Syndromes)20:23471738-23476655  ENSG00000125815
CONAN: Copy Number AnalysisCST8 
Mutations
ICGC Data PortalCST8 
TCGA Data PortalCST8 
Broad Tumor PortalCST8
OASIS PortalCST8 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCST8  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDCST8
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch CST8
DgiDB (Drug Gene Interaction Database)CST8
DoCM (Curated mutations)CST8 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CST8 (select a term)
intoGenCST8
Cancer3DCST8(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM608683   
Orphanet
MedgenCST8
Genetic Testing Registry CST8
NextProtO60676 [Medical]
TSGene10047
GENETestsCST8
Huge Navigator CST8 [HugePedia]
snp3D : Map Gene to Disease10047
BioCentury BCIQCST8
ClinGenCST8
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD10047
Chemical/Pharm GKB GenePA26981
Clinical trialCST8
Miscellaneous
canSAR (ICR)CST8 (select the gene name)
Probes
Litterature
PubMed15 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCST8
EVEXCST8
GoPubMedCST8
iHOPCST8
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:00:32 CET 2017

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