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CST9L (cystatin 9-like)

Identity

Alias_namescystatin 9 (mouse)-like
Alias_symbol (synonym)bA218C14.1
CTES7B
Other alias
HGNC (Hugo) CST9L
LocusID (NCBI) 128821
Atlas_Id 62147
Location 20p11.21  [Link to chromosome band 20p11]
Location_base_pair Starts at 23545370 and ends at 23549386 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CST9L   16233
Cards
Entrez_Gene (NCBI)CST9L  128821  cystatin 9-like
AliasesCTES7B; bA218C14.1
GeneCards (Weizmann)CST9L
Ensembl hg19 (Hinxton)ENSG00000101435 [Gene_View]  chr20:23545370-23549386 [Contig_View]  CST9L [Vega]
Ensembl hg38 (Hinxton)ENSG00000101435 [Gene_View]  chr20:23545370-23549386 [Contig_View]  CST9L [Vega]
ICGC DataPortalENSG00000101435
TCGA cBioPortalCST9L
AceView (NCBI)CST9L
Genatlas (Paris)CST9L
WikiGenes128821
SOURCE (Princeton)CST9L
Genetics Home Reference (NIH)CST9L
Genomic and cartography
GoldenPath hg19 (UCSC)CST9L  -     chr20:23545370-23549386 -  20p11.21   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)CST9L  -     20p11.21   [Description]    (hg38-Dec_2013)
EnsemblCST9L - 20p11.21 [CytoView hg19]  CST9L - 20p11.21 [CytoView hg38]
Mapping of homologs : NCBICST9L [Mapview hg19]  CST9L [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK312112 AY358615 BC029656 DQ893686 DQ896517
RefSeq transcript (Entrez)NM_080610
RefSeq genomic (Entrez)NC_000020 NC_018931 NT_011387 NW_004929416
Consensus coding sequences : CCDS (NCBI)CST9L
Cluster EST : UnigeneHs.121554 [ NCBI ]
CGAP (NCI)Hs.121554
Alternative Splicing GalleryENSG00000101435
Gene ExpressionCST9L [ NCBI-GEO ]   CST9L [ EBI - ARRAY_EXPRESS ]   CST9L [ SEEK ]   CST9L [ MEM ]
Gene Expression Viewer (FireBrowse)CST9L [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)128821
GTEX Portal (Tissue expression)CST9L
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9H4G1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9H4G1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9H4G1
Splice isoforms : SwissVarQ9H4G1
PhosPhoSitePlusQ9H4G1
Domains : Interpro (EBI)CST9_like    Cystatin    Prot_inh_cystat   
Domain families : Pfam (Sanger)Cystatin (PF00031)   
Domain families : Pfam (NCBI)pfam00031   
Domain families : Smart (EMBL)CY (SM00043)  
Conserved Domain (NCBI)CST9L
DMDM Disease mutations128821
Blocks (Seattle)CST9L
SuperfamilyQ9H4G1
Human Protein AtlasENSG00000101435
Peptide AtlasQ9H4G1
HPRD16769
IPIIPI00026001   
Protein Interaction databases
DIP (DOE-UCLA)Q9H4G1
IntAct (EBI)Q9H4G1
FunCoupENSG00000101435
BioGRIDCST9L
STRING (EMBL)CST9L
ZODIACCST9L
Ontologies - Pathways
QuickGOQ9H4G1
Ontology : AmiGOcysteine-type endopeptidase inhibitor activity  protein binding  extracellular region  negative regulation of endopeptidase activity  
Ontology : EGO-EBIcysteine-type endopeptidase inhibitor activity  protein binding  extracellular region  negative regulation of endopeptidase activity  
NDEx NetworkCST9L
Atlas of Cancer Signalling NetworkCST9L
Wikipedia pathwaysCST9L
Orthology - Evolution
OrthoDB128821
GeneTree (enSembl)ENSG00000101435
Phylogenetic Trees/Animal Genes : TreeFamCST9L
HOVERGENQ9H4G1
HOGENOMQ9H4G1
Homologs : HomoloGeneCST9L
Homology/Alignments : Family Browser (UCSC)CST9L
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCST9L [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CST9L
dbVarCST9L
ClinVarCST9L
1000_GenomesCST9L 
Exome Variant ServerCST9L
ExAC (Exome Aggregation Consortium)CST9L (select the gene name)
Genetic variants : HAPMAP128821
Genomic Variants (DGV)CST9L [DGVbeta]
DECIPHER (Syndromes)20:23545370-23549386  ENSG00000101435
CONAN: Copy Number AnalysisCST9L 
Mutations
ICGC Data PortalCST9L 
TCGA Data PortalCST9L 
Broad Tumor PortalCST9L
OASIS PortalCST9L [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCST9L  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDCST9L
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch CST9L
DgiDB (Drug Gene Interaction Database)CST9L
DoCM (Curated mutations)CST9L (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CST9L (select a term)
intoGenCST9L
Cancer3DCST9L(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenCST9L
Genetic Testing Registry CST9L
NextProtQ9H4G1 [Medical]
TSGene128821
GENETestsCST9L
Huge Navigator CST9L [HugePedia]
snp3D : Map Gene to Disease128821
BioCentury BCIQCST9L
ClinGenCST9L
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD128821
Chemical/Pharm GKB GenePA26982
Clinical trialCST9L
Miscellaneous
canSAR (ICR)CST9L (select the gene name)
Probes
Litterature
PubMed17 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCST9L
EVEXCST9L
GoPubMedCST9L
iHOPCST9L
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:00:32 CET 2017

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