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CSTF3-DT (CSTF3 divergent transcript)

Identity

Alias (NCBI)CSTF3-AS1
HGNC (Hugo) CSTF3-DT
LocusID (NCBI) 338739
Atlas_Id 80602
Location 11p13  [Link to chromosome band 11p13]
Location_base_pair Starts at 33161657 and ends at 33191596 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

Nomenclature
HGNC (Hugo)CSTF3-DT   27882
Cards
Entrez_Gene (NCBI)CSTF3-DT    CSTF3 divergent transcript
AliasesCSTF3-AS1
GeneCards (Weizmann)CSTF3-DT
Ensembl hg19 (Hinxton)ENSG00000247151 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000247151 [Gene_View]  ENSG00000247151 [Sequence]  chr11:33161657-33191596 [Contig_View]  CSTF3-DT [Vega]
ICGC DataPortalENSG00000247151
TCGA cBioPortalCSTF3-DT
AceView (NCBI)CSTF3-DT
Genatlas (Paris)CSTF3-DT
SOURCE (Princeton)CSTF3-DT
Genetics Home Reference (NIH)CSTF3-DT
Genomic and cartography
GoldenPath hg38 (UCSC)CSTF3-DT  -     chr11:33161657-33191596 +  11p13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CSTF3-DT  -     11p13   [Description]    (hg19-Feb_2009)
GoldenPathCSTF3-DT - 11p13 [CytoView hg19]  CSTF3-DT - 11p13 [CytoView hg38]
ImmunoBaseENSG00000247151
genome Data Viewer NCBICSTF3-DT [Mapview hg19]  
Gene and transcription
Genbank (Entrez)BC043375 DA256284
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CSTF3-DT
Alternative Splicing GalleryENSG00000247151
Gene ExpressionCSTF3-DT [ NCBI-GEO ]   CSTF3-DT [ EBI - ARRAY_EXPRESS ]   CSTF3-DT [ SEEK ]   CSTF3-DT [ MEM ]
Gene Expression Viewer (FireBrowse)CSTF3-DT [ Firebrowse - Broad ]
GenevisibleExpression of CSTF3-DT in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)338739
GTEX Portal (Tissue expression)CSTF3-DT
Human Protein AtlasENSG00000247151-CSTF3-DT [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CSTF3-DT
Blocks (Seattle)CSTF3-DT
Human Protein Atlas [tissue]ENSG00000247151-CSTF3-DT [tissue]
Protein Interaction databases
BioGRIDCSTF3-DT
STRING (EMBL)CSTF3-DT
ZODIACCSTF3-DT
Ontologies - Pathways
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCSTF3-DT
EVEXCSTF3-DT
GoPubMedCSTF3-DT
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Sat Dec 5 16:50:54 CET 2020

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