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CT45A8 (cancer/testis antigen family 45, member A8)

Identity

Other alias-
HGNC (Hugo) CT45A8
LocusID (NCBI) 102723737
Atlas_Id 54933
Location Xq26.3  [Link to chromosome band Xq26]
Location_base_pair Starts at 134866214 and ends at 134874249 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CT45A8   51261
Cards
Entrez_Gene (NCBI)CT45A8  102723737  cancer/testis antigen family 45, member A8
Aliases
GeneCards (Weizmann)CT45A8
Ensembl hg19 (Hinxton)ENSG00000278085 [Gene_View]  chrX:134866214-134874249 [Contig_View]  CT45A8 [Vega]
Ensembl hg38 (Hinxton)ENSG00000278085 [Gene_View]  chrX:134866214-134874249 [Contig_View]  CT45A8 [Vega]
ICGC DataPortalENSG00000278085
TCGA cBioPortalCT45A8
AceView (NCBI)CT45A8
Genatlas (Paris)CT45A8
WikiGenes102723737
SOURCE (Princeton)CT45A8
Genetics Home Reference (NIH)CT45A8
Genomic and cartography
GoldenPath hg19 (UCSC)CT45A8  -     chrX:134866214-134874249 +  Xq26.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)CT45A8  -     Xq26.3   [Description]    (hg38-Dec_2013)
EnsemblCT45A8 - Xq26.3 [CytoView hg19]  CT45A8 - Xq26.3 [CytoView hg38]
Mapping of homologs : NCBICT45A8 [Mapview hg19]  CT45A8 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BP371111
RefSeq transcript (Entrez)NM_001291535
RefSeq genomic (Entrez)NC_000023 NC_018934 NT_011786 NW_004929446
Consensus coding sequences : CCDS (NCBI)CT45A8
Cluster EST : UnigeneHs.568346 [ NCBI ]
CGAP (NCI)Hs.568346
Alternative Splicing GalleryENSG00000278085
Gene ExpressionCT45A8 [ NCBI-GEO ]   CT45A8 [ EBI - ARRAY_EXPRESS ]   CT45A8 [ SEEK ]   CT45A8 [ MEM ]
Gene Expression Viewer (FireBrowse)CT45A8 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)102723737
GTEX Portal (Tissue expression)CT45A8
Protein : pattern, domain, 3D structure
UniProt/SwissProtP0DMV1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP0DMV1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP0DMV1
Splice isoforms : SwissVarP0DMV1
PhosPhoSitePlusP0DMV1
Domains : Interpro (EBI)INT_SG_DDX_CT_C   
Domain families : Pfam (Sanger)INT_SG_DDX_CT_C (PF15300)   
Domain families : Pfam (NCBI)pfam15300   
Conserved Domain (NCBI)CT45A8
DMDM Disease mutations102723737
Blocks (Seattle)CT45A8
SuperfamilyP0DMV1
Human Protein AtlasENSG00000278085
Peptide AtlasP0DMV1
Protein Interaction databases
DIP (DOE-UCLA)P0DMV1
IntAct (EBI)P0DMV1
FunCoupENSG00000278085
BioGRIDCT45A8
STRING (EMBL)CT45A8
ZODIACCT45A8
Ontologies - Pathways
QuickGOP0DMV1
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkCT45A8
Atlas of Cancer Signalling NetworkCT45A8
Wikipedia pathwaysCT45A8
Orthology - Evolution
OrthoDB102723737
GeneTree (enSembl)ENSG00000278085
Phylogenetic Trees/Animal Genes : TreeFamCT45A8
HOVERGENP0DMV1
HOGENOMP0DMV1
Homologs : HomoloGeneCT45A8
Homology/Alignments : Family Browser (UCSC)CT45A8
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCT45A8 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CT45A8
dbVarCT45A8
ClinVarCT45A8
1000_GenomesCT45A8 
Exome Variant ServerCT45A8
ExAC (Exome Aggregation Consortium)CT45A8 (select the gene name)
Genetic variants : HAPMAP102723737
Genomic Variants (DGV)CT45A8 [DGVbeta]
DECIPHER (Syndromes)X:134866214-134874249  ENSG00000278085
CONAN: Copy Number AnalysisCT45A8 
Mutations
ICGC Data PortalCT45A8 
TCGA Data PortalCT45A8 
Broad Tumor PortalCT45A8
OASIS PortalCT45A8 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDCT45A8
BioMutasearch CT45A8
DgiDB (Drug Gene Interaction Database)CT45A8
DoCM (Curated mutations)CT45A8 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CT45A8 (select a term)
intoGenCT45A8
Cancer3DCT45A8(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenCT45A8
Genetic Testing Registry CT45A8
NextProtP0DMV1 [Medical]
TSGene102723737
GENETestsCT45A8
Huge Navigator CT45A8 [HugePedia]
snp3D : Map Gene to Disease102723737
BioCentury BCIQCT45A8
ClinGenCT45A8
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD102723737
Clinical trialCT45A8
Miscellaneous
canSAR (ICR)CT45A8 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCT45A8
EVEXCT45A8
GoPubMedCT45A8
iHOPCT45A8
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Mar 30 14:57:51 CEST 2017

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