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CTAGE5 (CTAGE family member 5)

Identity

Alias_namesMGEA
MGEA6
meningioma expressed antigen 6 (coiled-coil proline-rich)
CTAGE family, member 5
CTAGE family member 5
Alias_symbol (synonym)MEA6
cTAGE-5A
cTAGE-5B
cTAGE-5C
cTAGE-5D
MGEA11
Other alias
HGNC (Hugo) CTAGE5
LocusID (NCBI) 4253
Atlas_Id 41360
Location 14q21.1  [Link to chromosome band 14q21]
Location_base_pair Starts at 39735502 and ends at 39820397 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
CTAGE5 (14q21.1) / GEMIN2 (14q21.1)CTAGE5 (14q21.1) / KHDRBS3 (8q24.23)CTAGE5 (14q21.1) / MIA2 (14q21.1)
CTAGE5 (14q21.1) / PSMA3 (14q23.1)CTAGE5 GEMIN2 14q21.1CTAGE5 14q21.1 / MIA2 14q21.1

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CTAGE5   7057
Cards
Entrez_Gene (NCBI)CTAGE5  4253  CTAGE family member 5
AliasesMEA6; MGEA; MGEA11; MGEA6
GeneCards (Weizmann)CTAGE5
Ensembl hg19 (Hinxton)ENSG00000150527 [Gene_View]  chr14:39735502-39820397 [Contig_View]  CTAGE5 [Vega]
Ensembl hg38 (Hinxton)ENSG00000150527 [Gene_View]  chr14:39735502-39820397 [Contig_View]  CTAGE5 [Vega]
ICGC DataPortalENSG00000150527
TCGA cBioPortalCTAGE5
AceView (NCBI)CTAGE5
Genatlas (Paris)CTAGE5
WikiGenes4253
SOURCE (Princeton)CTAGE5
Genetics Home Reference (NIH)CTAGE5
Genomic and cartography
GoldenPath hg19 (UCSC)CTAGE5  -     chr14:39735502-39820397 +  14q21.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)CTAGE5  -     14q21.1   [Description]    (hg38-Dec_2013)
EnsemblCTAGE5 - 14q21.1 [CytoView hg19]  CTAGE5 - 14q21.1 [CytoView hg38]
Mapping of homologs : NCBICTAGE5 [Mapview hg19]  CTAGE5 [Mapview hg38]
OMIM602132   
Gene and transcription
Genbank (Entrez)AA731729 AB209528 AF338233 AF338234 AI521895
RefSeq transcript (Entrez)NM_001247988 NM_001247989 NM_001247990 NM_005930 NM_203354 NM_203355 NM_203356 NM_203357
RefSeq genomic (Entrez)NC_000014 NC_018925 NG_030349 NT_026437 NW_004929393
Consensus coding sequences : CCDS (NCBI)CTAGE5
Cluster EST : UnigeneHs.741763 [ NCBI ]
CGAP (NCI)Hs.741763
Alternative Splicing GalleryENSG00000150527
Gene ExpressionCTAGE5 [ NCBI-GEO ]   CTAGE5 [ EBI - ARRAY_EXPRESS ]   CTAGE5 [ SEEK ]   CTAGE5 [ MEM ]
Gene Expression Viewer (FireBrowse)CTAGE5 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)4253
GTEX Portal (Tissue expression)CTAGE5
Protein : pattern, domain, 3D structure
UniProt/SwissProtO15320   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO15320  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO15320
Splice isoforms : SwissVarO15320
PhosPhoSitePlusO15320
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CTAGE5
DMDM Disease mutations4253
Blocks (Seattle)CTAGE5
SuperfamilyO15320
Human Protein AtlasENSG00000150527
Peptide AtlasO15320
HPRD03680
IPIIPI00006122   IPI00218139   IPI00401163   IPI00515009   IPI00915443   IPI00872345   IPI00915291   IPI00915283   IPI00908361   IPI01025863   IPI01025352   IPI00402229   
Protein Interaction databases
DIP (DOE-UCLA)O15320
IntAct (EBI)O15320
FunCoupENSG00000150527
BioGRIDCTAGE5
STRING (EMBL)CTAGE5
ZODIACCTAGE5
Ontologies - Pathways
QuickGOO15320
Ontology : AmiGOprotein binding  endoplasmic reticulum membrane  ER to Golgi vesicle-mediated transport  enzyme activator activity  membrane  positive regulation of catalytic activity  
Ontology : EGO-EBIprotein binding  endoplasmic reticulum membrane  ER to Golgi vesicle-mediated transport  enzyme activator activity  membrane  positive regulation of catalytic activity  
NDEx NetworkCTAGE5
Atlas of Cancer Signalling NetworkCTAGE5
Wikipedia pathwaysCTAGE5
Orthology - Evolution
OrthoDB4253
GeneTree (enSembl)ENSG00000150527
Phylogenetic Trees/Animal Genes : TreeFamCTAGE5
HOVERGENO15320
HOGENOMO15320
Homologs : HomoloGeneCTAGE5
Homology/Alignments : Family Browser (UCSC)CTAGE5
Gene fusions - Rearrangements
Fusion : MitelmanCTAGE5/GEMIN2 [14q21.1/14q21.1]  
Fusion : MitelmanCTAGE5/KHDRBS3 [14q21.1/8q24.23]  [t(8;14)(q24;q21)]  
Fusion : MitelmanCTAGE5/MIA2 [14q21.1/14q21.1]  [t(14;14)(q21;q21)]  
Fusion : MitelmanCTAGE5/PSMA3 [14q21.1/14q23.1]  [t(14;14)(q21;q23)]  
Fusion: TCGACTAGE5 14q21.1 MIA2 14q21.1 HNSC
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCTAGE5 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CTAGE5
dbVarCTAGE5
ClinVarCTAGE5
1000_GenomesCTAGE5 
Exome Variant ServerCTAGE5
ExAC (Exome Aggregation Consortium)CTAGE5 (select the gene name)
Genetic variants : HAPMAP4253
Genomic Variants (DGV)CTAGE5 [DGVbeta]
DECIPHER (Syndromes)14:39735502-39820397  ENSG00000150527
CONAN: Copy Number AnalysisCTAGE5 
Mutations
ICGC Data PortalCTAGE5 
TCGA Data PortalCTAGE5 
Broad Tumor PortalCTAGE5
OASIS PortalCTAGE5 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCTAGE5  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDCTAGE5
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch CTAGE5
DgiDB (Drug Gene Interaction Database)CTAGE5
DoCM (Curated mutations)CTAGE5 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CTAGE5 (select a term)
intoGenCTAGE5
Cancer3DCTAGE5(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM602132   
Orphanet
MedgenCTAGE5
Genetic Testing Registry CTAGE5
NextProtO15320 [Medical]
TSGene4253
GENETestsCTAGE5
Huge Navigator CTAGE5 [HugePedia]
snp3D : Map Gene to Disease4253
BioCentury BCIQCTAGE5
ClinGenCTAGE5
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD4253
Chemical/Pharm GKB GenePA30788
Clinical trialCTAGE5
Miscellaneous
canSAR (ICR)CTAGE5 (select the gene name)
Probes
Litterature
PubMed25 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCTAGE5
EVEXCTAGE5
GoPubMedCTAGE5
iHOPCTAGE5
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Mar 30 14:57:55 CEST 2017

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