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CTAGE6 (CTAGE family member 6)

Identity

Alias (NCBI)CTAGE6P
HGNC (Hugo) CTAGE6
HGNC Alias symbMGC41943
HGNC Previous nameCTAGE6P
HGNC Previous nameCTAGE family, member 6, pseudogene
 CTAGE family, member 6
LocusID (NCBI) 340307
Atlas_Id 62155
Location 7q35  [Link to chromosome band 7q35]
Location_base_pair Starts at 143755089 and ends at 143757696 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)CTAGE6   28644
Cards
Entrez_Gene (NCBI)CTAGE6    CTAGE family member 6
AliasesCTAGE6P
GeneCards (Weizmann)CTAGE6
Ensembl hg19 (Hinxton)ENSG00000271321 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000271321 [Gene_View]  ENSG00000271321 [Sequence]  chr7:143755089-143757696 [Contig_View]  CTAGE6 [Vega]
ICGC DataPortalENSG00000271321
TCGA cBioPortalCTAGE6
AceView (NCBI)CTAGE6
Genatlas (Paris)CTAGE6
SOURCE (Princeton)CTAGE6
Genetics Home Reference (NIH)CTAGE6
Genomic and cartography
GoldenPath hg38 (UCSC)CTAGE6  -     chr7:143755089-143757696 -  7q35   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CTAGE6  -     7q35   [Description]    (hg19-Feb_2009)
GoldenPathCTAGE6 - 7q35 [CytoView hg19]  CTAGE6 - 7q35 [CytoView hg38]
ImmunoBaseENSG00000271321
Genome Data Viewer NCBICTAGE6 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)BC043153 BC101323 BC101324 BC110410
RefSeq transcript (Entrez)NM_178561
Consensus coding sequences : CCDS (NCBI)CTAGE6
Gene ExpressionCTAGE6 [ NCBI-GEO ]   CTAGE6 [ EBI - ARRAY_EXPRESS ]   CTAGE6 [ SEEK ]   CTAGE6 [ MEM ]
Gene Expression Viewer (FireBrowse)CTAGE6 [ Firebrowse - Broad ]
GenevisibleExpression of CTAGE6 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)340307
GTEX Portal (Tissue expression)CTAGE6
Human Protein AtlasENSG00000271321-CTAGE6 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ86UF2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ86UF2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ86UF2
PhosPhoSitePlusQ86UF2
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CTAGE6
SuperfamilyQ86UF2
AlphaFold pdb e-kbQ86UF2   
Human Protein Atlas [tissue]ENSG00000271321-CTAGE6 [tissue]
Protein Interaction databases
DIP (DOE-UCLA)Q86UF2
IntAct (EBI)Q86UF2
BioGRIDCTAGE6
STRING (EMBL)CTAGE6
ZODIACCTAGE6
Ontologies - Pathways
QuickGOQ86UF2
Ontology : AmiGOcellular_component  endoplasmic reticulum membrane  endoplasmic reticulum to Golgi vesicle-mediated transport  biological_process  protein secretion  integral component of membrane  vesicle cargo loading  endoplasmic reticulum exit site  
Ontology : EGO-EBIcellular_component  endoplasmic reticulum membrane  endoplasmic reticulum to Golgi vesicle-mediated transport  biological_process  protein secretion  integral component of membrane  vesicle cargo loading  endoplasmic reticulum exit site  
NDEx NetworkCTAGE6
Atlas of Cancer Signalling NetworkCTAGE6
Wikipedia pathwaysCTAGE6
Orthology - Evolution
OrthoDB340307
GeneTree (enSembl)ENSG00000271321
Phylogenetic Trees/Animal Genes : TreeFamCTAGE6
Homologs : HomoloGeneCTAGE6
Homology/Alignments : Family Browser (UCSC)CTAGE6
Gene fusions - Rearrangements
Fusion : QuiverCTAGE6
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCTAGE6 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CTAGE6
dbVarCTAGE6
ClinVarCTAGE6
MonarchCTAGE6
1000_GenomesCTAGE6 
Exome Variant ServerCTAGE6
GNOMAD BrowserENSG00000271321
Varsome BrowserCTAGE6
ACMGCTAGE6 variants
VarityQ86UF2
Genomic Variants (DGV)CTAGE6 [DGVbeta]
DECIPHERCTAGE6 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCTAGE6 
Mutations
ICGC Data PortalCTAGE6 
TCGA Data PortalCTAGE6 
Broad Tumor PortalCTAGE6
OASIS PortalCTAGE6 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCTAGE6  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DCTAGE6
Mutations and Diseases : HGMDCTAGE6
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaCTAGE6
DgiDB (Drug Gene Interaction Database)CTAGE6
DoCM (Curated mutations)CTAGE6
CIViC (Clinical Interpretations of Variants in Cancer)CTAGE6
Cancer3DCTAGE6
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETCTAGE6
MedgenCTAGE6
Genetic Testing Registry CTAGE6
NextProtQ86UF2 [Medical]
GENETestsCTAGE6
Target ValidationCTAGE6
Huge Navigator CTAGE6 [HugePedia]
ClinGenCTAGE6
Clinical trials, drugs, therapy
MyCancerGenomeCTAGE6
Protein Interactions : CTDCTAGE6
Pharm GKB GenePA165617921
PharosQ86UF2
Clinical trialCTAGE6
Miscellaneous
canSAR (ICR)CTAGE6
HarmonizomeCTAGE6
DataMed IndexCTAGE6
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXCTAGE6
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:47:01 CEST 2021

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