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CTAGE8 (CTAGE family member 8)

Identity

Alias (NCBI)CTAGE4
HGNC (Hugo) CTAGE8
HGNC Previous nameCTAGE family, member 8
LocusID (NCBI) 100142659
Atlas_Id 62157
Location 7q35  [Link to chromosome band 7q35]
Location_base_pair Starts at 144182970 and ends at 144186081 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)CTAGE8   37294
Cards
Entrez_Gene (NCBI)CTAGE8    CTAGE family member 8
AliasesCTAGE4
GeneCards (Weizmann)CTAGE8
Ensembl hg19 (Hinxton)ENSG00000244693 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000244693 [Gene_View]  ENSG00000244693 [Sequence]  chr7:144182970-144186081 [Contig_View]  CTAGE8 [Vega]
ICGC DataPortalENSG00000244693
TCGA cBioPortalCTAGE8
AceView (NCBI)CTAGE8
Genatlas (Paris)CTAGE8
SOURCE (Princeton)CTAGE8
Genetics Home Reference (NIH)CTAGE8
Genomic and cartography
GoldenPath hg38 (UCSC)CTAGE8  -     chr7:144182970-144186081 +  7q35   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CTAGE8  -     7q35   [Description]    (hg19-Feb_2009)
GoldenPathCTAGE8 - 7q35 [CytoView hg19]  CTAGE8 - 7q35 [CytoView hg38]
ImmunoBaseENSG00000244693
Genome Data Viewer NCBICTAGE8 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AI274481 AK292236 CB529778 CN429509
RefSeq transcript (Entrez)NM_001278507
Consensus coding sequences : CCDS (NCBI)CTAGE8
Gene ExpressionCTAGE8 [ NCBI-GEO ]   CTAGE8 [ EBI - ARRAY_EXPRESS ]   CTAGE8 [ SEEK ]   CTAGE8 [ MEM ]
Gene Expression Viewer (FireBrowse)CTAGE8 [ Firebrowse - Broad ]
GenevisibleExpression of CTAGE8 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100142659
GTEX Portal (Tissue expression)CTAGE8
Human Protein AtlasENSG00000244693-CTAGE8 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP0CG41   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP0CG41  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP0CG41
PhosPhoSitePlusP0CG41
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CTAGE8
SuperfamilyP0CG41
AlphaFold pdb e-kbP0CG41   
Human Protein Atlas [tissue]ENSG00000244693-CTAGE8 [tissue]
Protein Interaction databases
DIP (DOE-UCLA)P0CG41
IntAct (EBI)P0CG41
BioGRIDCTAGE8
STRING (EMBL)CTAGE8
ZODIACCTAGE8
Ontologies - Pathways
QuickGOP0CG41
Ontology : AmiGOendoplasmic reticulum membrane  endoplasmic reticulum to Golgi vesicle-mediated transport  protein secretion  integral component of membrane  vesicle cargo loading  endoplasmic reticulum exit site  
Ontology : EGO-EBIendoplasmic reticulum membrane  endoplasmic reticulum to Golgi vesicle-mediated transport  protein secretion  integral component of membrane  vesicle cargo loading  endoplasmic reticulum exit site  
NDEx NetworkCTAGE8
Atlas of Cancer Signalling NetworkCTAGE8
Wikipedia pathwaysCTAGE8
Orthology - Evolution
OrthoDB100142659
GeneTree (enSembl)ENSG00000244693
Phylogenetic Trees/Animal Genes : TreeFamCTAGE8
Homologs : HomoloGeneCTAGE8
Homology/Alignments : Family Browser (UCSC)CTAGE8
Gene fusions - Rearrangements
Fusion : QuiverCTAGE8
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCTAGE8 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CTAGE8
dbVarCTAGE8
ClinVarCTAGE8
MonarchCTAGE8
1000_GenomesCTAGE8 
Exome Variant ServerCTAGE8
GNOMAD BrowserENSG00000244693
Varsome BrowserCTAGE8
ACMGCTAGE8 variants
VarityP0CG41
Genomic Variants (DGV)CTAGE8 [DGVbeta]
DECIPHERCTAGE8 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCTAGE8 
Mutations
ICGC Data PortalCTAGE8 
TCGA Data PortalCTAGE8 
Broad Tumor PortalCTAGE8
OASIS PortalCTAGE8 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCTAGE8  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DCTAGE8
Mutations and Diseases : HGMDCTAGE8
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaCTAGE8
DgiDB (Drug Gene Interaction Database)CTAGE8
DoCM (Curated mutations)CTAGE8
CIViC (Clinical Interpretations of Variants in Cancer)CTAGE8
Cancer3DCTAGE8
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETCTAGE8
MedgenCTAGE8
Genetic Testing Registry CTAGE8
NextProtP0CG41 [Medical]
GENETestsCTAGE8
Target ValidationCTAGE8
Huge Navigator CTAGE8 [HugePedia]
ClinGenCTAGE8
Clinical trials, drugs, therapy
MyCancerGenomeCTAGE8
Protein Interactions : CTDCTAGE8
Pharm GKB GenePA166123683
PharosP0CG41
Clinical trialCTAGE8
Miscellaneous
canSAR (ICR)CTAGE8
HarmonizomeCTAGE8
DataMed IndexCTAGE8
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXCTAGE8
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:47:02 CEST 2021

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