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CTAGE8 (CTAGE family member 8)

Identity

Alias_namesCTAGE family, member 8
Other alias-
HGNC (Hugo) CTAGE8
LocusID (NCBI) 100142659
Atlas_Id 62157
Location 7q35  [Link to chromosome band 7q35]
Location_base_pair Starts at 144182970 and ends at 144186081 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CTAGE8   37294
Cards
Entrez_Gene (NCBI)CTAGE8  100142659  CTAGE family member 8
Aliases
GeneCards (Weizmann)CTAGE8
Ensembl hg19 (Hinxton)ENSG00000244693 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000244693 [Gene_View]  chr7:144182970-144186081 [Contig_View]  CTAGE8 [Vega]
ICGC DataPortalENSG00000244693
TCGA cBioPortalCTAGE8
AceView (NCBI)CTAGE8
Genatlas (Paris)CTAGE8
WikiGenes100142659
SOURCE (Princeton)CTAGE8
Genetics Home Reference (NIH)CTAGE8
Genomic and cartography
GoldenPath hg38 (UCSC)CTAGE8  -     chr7:144182970-144186081 +  7q35   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CTAGE8  -     7q35   [Description]    (hg19-Feb_2009)
EnsemblCTAGE8 - 7q35 [CytoView hg19]  CTAGE8 - 7q35 [CytoView hg38]
Mapping of homologs : NCBICTAGE8 [Mapview hg19]  CTAGE8 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI274481 AK292236 CB529778 CN429509
RefSeq transcript (Entrez)NM_001278507
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CTAGE8
Cluster EST : UnigeneHs.720693 [ NCBI ]
CGAP (NCI)Hs.720693
Alternative Splicing GalleryENSG00000244693
Gene ExpressionCTAGE8 [ NCBI-GEO ]   CTAGE8 [ EBI - ARRAY_EXPRESS ]   CTAGE8 [ SEEK ]   CTAGE8 [ MEM ]
Gene Expression Viewer (FireBrowse)CTAGE8 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100142659
GTEX Portal (Tissue expression)CTAGE8
Human Protein AtlasENSG00000244693-CTAGE8 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP0CG41   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP0CG41  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP0CG41
Splice isoforms : SwissVarP0CG41
PhosPhoSitePlusP0CG41
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CTAGE8
DMDM Disease mutations100142659
Blocks (Seattle)CTAGE8
SuperfamilyP0CG41
Human Protein Atlas [tissue]ENSG00000244693-CTAGE8 [tissue]
Peptide AtlasP0CG41
IPIIPI00030542   
Protein Interaction databases
DIP (DOE-UCLA)P0CG41
IntAct (EBI)P0CG41
FunCoupENSG00000244693
BioGRIDCTAGE8
STRING (EMBL)CTAGE8
ZODIACCTAGE8
Ontologies - Pathways
QuickGOP0CG41
Ontology : AmiGOintegral component of membrane  
Ontology : EGO-EBIintegral component of membrane  
NDEx NetworkCTAGE8
Atlas of Cancer Signalling NetworkCTAGE8
Wikipedia pathwaysCTAGE8
Orthology - Evolution
OrthoDB100142659
GeneTree (enSembl)ENSG00000244693
Phylogenetic Trees/Animal Genes : TreeFamCTAGE8
HOVERGENP0CG41
HOGENOMP0CG41
Homologs : HomoloGeneCTAGE8
Homology/Alignments : Family Browser (UCSC)CTAGE8
Gene fusions - Rearrangements
Tumor Fusion PortalCTAGE8
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCTAGE8 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CTAGE8
dbVarCTAGE8
ClinVarCTAGE8
1000_GenomesCTAGE8 
Exome Variant ServerCTAGE8
ExAC (Exome Aggregation Consortium)ENSG00000244693
GNOMAD BrowserENSG00000244693
Genetic variants : HAPMAP100142659
Genomic Variants (DGV)CTAGE8 [DGVbeta]
DECIPHERCTAGE8 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCTAGE8 
Mutations
ICGC Data PortalCTAGE8 
TCGA Data PortalCTAGE8 
Broad Tumor PortalCTAGE8
OASIS PortalCTAGE8 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCTAGE8  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDCTAGE8
BioMutasearch CTAGE8
DgiDB (Drug Gene Interaction Database)CTAGE8
DoCM (Curated mutations)CTAGE8 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CTAGE8 (select a term)
intoGenCTAGE8
Cancer3DCTAGE8(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETCTAGE8
MedgenCTAGE8
Genetic Testing Registry CTAGE8
NextProtP0CG41 [Medical]
TSGene100142659
GENETestsCTAGE8
Target ValidationCTAGE8
Huge Navigator CTAGE8 [HugePedia]
snp3D : Map Gene to Disease100142659
BioCentury BCIQCTAGE8
ClinGenCTAGE8
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100142659
Chemical/Pharm GKB GenePA166123683
Clinical trialCTAGE8
Miscellaneous
canSAR (ICR)CTAGE8 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCTAGE8
EVEXCTAGE8
GoPubMedCTAGE8
iHOPCTAGE8
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:15:55 CET 2017

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