Atlas of Genetics and Cytogenetics in Oncology and Haematology


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CTB-178M22.2 (uncharacterized LOC101927862)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 101927862
Atlas_Id 62161
Location 5q34  [Link to chromosome band 5q34]
Location_base_pair Starts at 167656588 and ends at 167659377 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)CTB-178M22.2  101927862  uncharacterized LOC101927862
Aliases
GeneCards (Weizmann)CTB-178M22.2
Ensembl hg19 (Hinxton)ENSG00000253978 [Gene_View]  chr5:167656588-167659377 [Contig_View]  CTB-178M22.2 [Vega]
Ensembl hg38 (Hinxton)ENSG00000253978 [Gene_View]  chr5:167656588-167659377 [Contig_View]  CTB-178M22.2 [Vega]
ICGC DataPortalENSG00000253978
TCGA cBioPortalCTB-178M22.2
AceView (NCBI)CTB-178M22.2
Genatlas (Paris)CTB-178M22.2
WikiGenes101927862
SOURCE (Princeton)CTB-178M22.2
Genetics Home Reference (NIH)CTB-178M22.2
Genomic and cartography
GoldenPath hg19 (UCSC)CTB-178M22.2  -     chr5:167656588-167659377 -  5q34   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)CTB-178M22.2  -     5q34   [Description]    (hg38-Dec_2013)
EnsemblCTB-178M22.2 - 5q34 [CytoView hg19]  CTB-178M22.2 - 5q34 [CytoView hg38]
Mapping of homologs : NCBICTB-178M22.2 [Mapview hg19]  CTB-178M22.2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)HG498724 N90849
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000005 NC_018916 NT_023133 NW_004929325
Consensus coding sequences : CCDS (NCBI)CTB-178M22.2
Cluster EST : UnigeneHs.659376 [ NCBI ]
CGAP (NCI)Hs.659376
Alternative Splicing GalleryENSG00000253978
Gene ExpressionCTB-178M22.2 [ NCBI-GEO ]   CTB-178M22.2 [ EBI - ARRAY_EXPRESS ]   CTB-178M22.2 [ SEEK ]   CTB-178M22.2 [ MEM ]
Gene Expression Viewer (FireBrowse)CTB-178M22.2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101927862
GTEX Portal (Tissue expression)CTB-178M22.2
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CTB-178M22.2
DMDM Disease mutations101927862
Blocks (Seattle)CTB-178M22.2
Human Protein AtlasENSG00000253978
Protein Interaction databases
FunCoupENSG00000253978
BioGRIDCTB-178M22.2
STRING (EMBL)CTB-178M22.2
ZODIACCTB-178M22.2
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease101927862
BioCentury BCIQCTB-178M22.2
ClinGenCTB-178M22.2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101927862
Clinical trialCTB-178M22.2
Miscellaneous
canSAR (ICR)CTB-178M22.2 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineCTB-178M22.2
EVEXCTB-178M22.2
GoPubMedCTB-178M22.2
iHOPCTB-178M22.2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:00:35 CET 2017

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