Atlas of Genetics and Cytogenetics in Oncology and Haematology


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CTD-2297D10.2 (uncharacterized LOC101929176)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 101929176
Atlas_Id 62175
Location 5p15.32  [Link to chromosome band 5p15]
Location_base_pair Starts at 5132085 and ends at 5140054 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)CTD-2297D10.2  101929176  uncharacterized LOC101929176
Aliases
GeneCards (Weizmann)CTD-2297D10.2
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr5:5132085-5140054 [Contig_View]  CTD-2297D10.2 [Vega]
TCGA cBioPortalCTD-2297D10.2
AceView (NCBI)CTD-2297D10.2
Genatlas (Paris)CTD-2297D10.2
WikiGenes101929176
SOURCE (Princeton)CTD-2297D10.2
Genetics Home Reference (NIH)CTD-2297D10.2
Genomic and cartography
GoldenPath hg38 (UCSC)CTD-2297D10.2  -     chr5:5132085-5140054 -  5p15.32   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CTD-2297D10.2  -     5p15.32   [Description]    (hg19-Feb_2009)
EnsemblCTD-2297D10.2 - 5p15.32 [CytoView hg19]  CTD-2297D10.2 - 5p15.32 [CytoView hg38]
Mapping of homologs : NCBICTD-2297D10.2 [Mapview hg19]  CTD-2297D10.2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI479586 AK094462 CN285426 DN602141
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CTD-2297D10.2
Cluster EST : UnigeneHs.582437 [ NCBI ]
CGAP (NCI)Hs.582437
Gene ExpressionCTD-2297D10.2 [ NCBI-GEO ]   CTD-2297D10.2 [ EBI - ARRAY_EXPRESS ]   CTD-2297D10.2 [ SEEK ]   CTD-2297D10.2 [ MEM ]
Gene Expression Viewer (FireBrowse)CTD-2297D10.2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101929176
GTEX Portal (Tissue expression)CTD-2297D10.2
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CTD-2297D10.2
DMDM Disease mutations101929176
Blocks (Seattle)CTD-2297D10.2
Protein Interaction databases
BioGRIDCTD-2297D10.2
STRING (EMBL)CTD-2297D10.2
ZODIACCTD-2297D10.2
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease101929176
BioCentury BCIQCTD-2297D10.2
ClinGenCTD-2297D10.2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101929176
Clinical trialCTD-2297D10.2
Miscellaneous
canSAR (ICR)CTD-2297D10.2 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCTD-2297D10.2
EVEXCTD-2297D10.2
GoPubMedCTD-2297D10.2
iHOPCTD-2297D10.2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:45:06 CET 2017

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