Atlas of Genetics and Cytogenetics in Oncology and Haematology


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CTD-3080P12.3 (uncharacterized LOC101928857)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 101928857
Atlas_Id 62177
Location 5p15.33  [Link to chromosome band 5p15]
Location_base_pair Starts at 1173096 and ends at 1178605 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)CTD-3080P12.3  101928857  uncharacterized LOC101928857
Aliases
GeneCards (Weizmann)CTD-3080P12.3
Ensembl hg19 (Hinxton)ENSG00000249201 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000249201 [Gene_View]  chr5:1173096-1178605 [Contig_View]  CTD-3080P12.3 [Vega]
ICGC DataPortalENSG00000249201
TCGA cBioPortalCTD-3080P12.3
AceView (NCBI)CTD-3080P12.3
Genatlas (Paris)CTD-3080P12.3
WikiGenes101928857
SOURCE (Princeton)CTD-3080P12.3
Genetics Home Reference (NIH)CTD-3080P12.3
Genomic and cartography
GoldenPath hg38 (UCSC)CTD-3080P12.3  -     chr5:1173096-1178605 -  5p15.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CTD-3080P12.3  -     5p15.33   [Description]    (hg19-Feb_2009)
EnsemblCTD-3080P12.3 - 5p15.33 [CytoView hg19]  CTD-3080P12.3 - 5p15.33 [CytoView hg38]
Mapping of homologs : NCBICTD-3080P12.3 [Mapview hg19]  CTD-3080P12.3 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK091791 AK097569 BC032469 R02194
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CTD-3080P12.3
Cluster EST : UnigeneHs.593732 [ NCBI ]
CGAP (NCI)Hs.593732
Alternative Splicing GalleryENSG00000249201
Gene ExpressionCTD-3080P12.3 [ NCBI-GEO ]   CTD-3080P12.3 [ EBI - ARRAY_EXPRESS ]   CTD-3080P12.3 [ SEEK ]   CTD-3080P12.3 [ MEM ]
Gene Expression Viewer (FireBrowse)CTD-3080P12.3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101928857
GTEX Portal (Tissue expression)CTD-3080P12.3
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CTD-3080P12.3
DMDM Disease mutations101928857
Blocks (Seattle)CTD-3080P12.3
Human Protein AtlasENSG00000249201
Protein Interaction databases
FunCoupENSG00000249201
BioGRIDCTD-3080P12.3
STRING (EMBL)CTD-3080P12.3
ZODIACCTD-3080P12.3
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease101928857
BioCentury BCIQCTD-3080P12.3
ClinGenCTD-3080P12.3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101928857
Clinical trialCTD-3080P12.3
Miscellaneous
canSAR (ICR)CTD-3080P12.3 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCTD-3080P12.3
EVEXCTD-3080P12.3
GoPubMedCTD-3080P12.3
iHOPCTD-3080P12.3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:44:51 CEST 2017

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